World-2DPAGE Home

WORLD-2DPAGE Links
How to link to 2-D PAGE databases indexed in the WORLD-2DPAGE List


This page contains references to known federated 2-D PAGE database servers, and examples of how to link to specific entry of these databases. For a full list of 2-D PAGE database servers, as well as to 2-D PAGE related servers and services, please refer to the WORLD-2DPAGE List.

DatabaseHow to link
Multi species
federatedSWISS-2DPAGE (Swiss Institute of Bioinformatics)
 
federatedWORLD-2DPAGE Repository (Swiss Institute of Bioinformatics) Linking to WORLD-2DPAGE Repository can be done the same way as with SWISS-2DPAGE.
You should only replace /swiss-2dpage/ by /repository/.
Example: http://world-2dpage.expasy.org/repository/P08499

You may limit your linking to a specific database from the Repository, by adding the argument database={database ID} to your URL.
Example: http://world-2dpage.expasy.org/repository/database=0001&ac=P08499
 
federatedSIENA-2DPAGE - 2D-PAGE database at Department of Molecular Biology, University of Siena, Italy http://www.bio-mol.unisi.it/cgi-bin/2d/2d.cgi?Swiss-Prot accession number(AC)
Example: http://www.bio-mol.unisi.it/cgi-bin/2d/2d.cgi?P01009
Linking can be done the same way as with SWISS-2DPAGE.
 
federatedUCD 2D-PAGE - The UCD Conway Institute Proteome Research Centre (CIPRC), University College Dublin, Ireland http://proteomics-portal.ucd.ie:8082/cgi-bin/2d/2d.cgi?Swiss-Prot accession number(AC)
Example: http://proteomics-portal.ucd.ie:8082/cgi-bin/2d/2d.cgi?P49289
Linking can be done the same way as with SWISS-2DPAGE.
 
federated2-DE databases, at Max Planck Institute for Infection Biology, Berlin, Germany European Bacteria Project: Chlamydia pneumoniae, Helicobacter pylori, Mycobacterium bovis and tuberculosis
http://www.mpiib-berlin.mpg.de/mpiib-cgi/ebp-page/search.cgi?type=result&search=all&columns=NCBI.SWISS_PROT_AccNo&keywords=accession number(AC)
Example: http://www.mpiib-berlin.mpg.de/mpiib-cgi/ebp-page/search.cgi?type=result&search=all&columns=NCBI.SWISS_PROT_AccNo&keywords=P31511
Other microorganisms: Borrelia garinii, Francisella tularensis, Mycoplasma pneumoniae
http://www.mpiib-berlin.mpg.de/mpiib-cgi/microorganisms/search.cgi?type=result&search=all&columns=NCBI.SWISS_PROT_AccNo&keywords=accession number(AC)
Example: http://www.mpiib-berlin.mpg.de/mpiib-cgi/microorganisms/search.cgi?type=result&search=all&columns=NCBI.SWISS_PROT_AccNo&keywords=P94798
Other organisms: Human Jurkat T-cells, Mouse mammary gland
http://www.mpiib-berlin.mpg.de/mpiib-cgi/organisms/search.cgi?type=result&search=all&columns=NCBI.SWISS_PROT_AccNo&keywords=accession number(AC)
Example: http://www.mpiib-berlin.mpg.de/mpiib-cgi/organisms/search.cgi?type=result&search=all&columns=NCBI.SWISS_PROT_AccNo&keywords=P07724
 
Mammalia
 
federatedDOSAC-COBS 2D-PAGE - University of Palermo, Italy http://www.dosac.unipa.it/cgi-bin/2d/2d.cgi?ac=Swiss-Prot accession number(AC)
Example: http://www.dosac.unipa.it/cgi-bin/2d/2d.cgi?ac=P00352
Linking can be done the same way as with SWISS-2DPAGE.
 
federatedHEART-2DPAGE (German Heart Institute Berlin) http://userpage.chemie.fu-berlin.de/cgi-bin/dhzb/findlink/~pleiss/protein_all.html?search=Swiss-Prot accession number(AC) or keyword
Example: http://userpage.chemie.fu-berlin.de/cgi-bin/dhzb/findlink/~pleiss/protein_all.html?search=P04270
 
federatedRAT HEART-2DPAGE (German Heart Institute Berlin) http://www.mpiib-berlin.mpg.de/mpiib-cgi/RAT-HEART/2d-search-ac?Swiss-Prot accession number(AC)
Example: http://www.mpiib-berlin.mpg.de/mpiib-cgi/RAT-HEART/2d-search-ac?P15999
 
federatedHSC-2DPAGE(Heart Science Centre, Harefield Hospital) http://www.doc.ic.ac.uk/vip/hsc-2dpage/cgi/allsearch.cgi/HAREFIELD-2DPAGE?Swiss-Prot accession number(AC)
Example: http://www.doc.ic.ac.uk/vip/hsc-2dpage/cgi/allsearch.cgi/HAREFIELD-2DPAGE?P49289
 
federatedOGP-WWW - Oxford GlycoProteomics Webpage http://proteomewww.glycob.ox.ac.uk/cgi-bin/get-2d-entry?Swiss-Prot accession number(AC)
Example: http://proteomewww.glycob.ox.ac.uk/cgi-bin/get-2d-entry?P42655
 
federatedPeroxisomal 2D-PAGE - Upsala University, Sweden http://www.sbc.su.se/~jia/2D/cgi-bin/2d/2d.cgi?ac=GI accession number
Example: http://www.sbc.su.se/~jia/2D/cgi-bin/2d/2d.cgi?ac=GI.10092608
 
federatedPPDB - PhosphoProtein DataBase http://www-lecb.ncifcrf.gov/cgi-bin/dbEngine?phosphoDB,getDataByID,Swiss-Prot accession number(AC) or ppDB ID #
Example: http://www-lecb.ncifcrf.gov/cgi-bin/dbEngine?phosphoDB,getDataByID,P26645
 
federatedREPRODUCTION-2DPAGE (Nanjing Medical University, PR. China) http://reprod.njmu.edu.cn/cgi-bin/2d/2d.cgi?Swiss-Prot accession number(AC)
Example: http://reprod.njmu.edu.cn/cgi-bin/2d/2d.cgi?P01009
Linking can be done the same way as with SWISS-2DPAGE.
 
federatedToothprint (2-DE gels of dental tissues - University of Otago, Dunedin, New Zealand) http://biocadmin.otago.ac.nz/tooth/FMPro?-db=toothprint.fm&-format=toothdb.htm&AC=Swiss-Prot accession number(AC)&-find
Example: http://biocadmin.otago.ac.nz:591/tooth/FMPro?-db=toothprint.fm&-format=toothdb.htm&AC=P11427&-find
 
partiallyWashington University Inner Ear Protein Database http://medicine.wustl.edu/cgi/AT-InnerEarsearch.cgi?search=Swiss-Prot accession number(AC) or keyword
Example: http://medicine.wustl.edu/cgi/AT-InnerEarsearch.cgi?search=P01009
 
Yeast
 
partiallyYPM - Yeast Protein Map at Institut de Biochimie et Génétique Cellulaires, Bordeaux, France http://www.ibgc.u-bordeaux2.fr/cgi-bin/getspot?YPM spot number
Example: http://www.ibgc.u-bordeaux2.fr/cgi-bin/getspot?B49B25
 
Other Eukaryota
 
federatedKAIKO 2DDB - the Silkworm-2DPAGE (various organs, tissues at various developmental stages) from National Institute of Agrobiological Sciences, Japan http://kaiko2ddb.dna.affrc.go.jp/cgi-bin/search_2DDB.cgi?ac=KAIKO accession number&database=KAIKO database name
Example: http://kaiko2ddb.dna.affrc.go.jp/cgi-bin/search_2DDB.cgi?ac=MGV3-F-017&database=midgut/female
Linking can be done the same way as with SWISS-2DPAGE and World-2DPAGE Repository.
 
Archaea, Bacteria, Viruses and Parasites
 
federated2DBase-Ecoli - A 2D-PAGE Database of Escherichia coli (various growing conditions) at University of Bielefeld - Fermentation Engineering Group (AGFT), Germany http://2dbase.techfak.uni-bielefeld.de/cgi-bin/2d/2d.cgi?ac=Swiss-Prot accession number(AC)
Example: http://2dbase.techfak.uni-bielefeld.de/cgi-bin/2d/2d.cgi?ac=P0A6N1
Linking can be done the same way as with SWISS-2DPAGE.
 
federatedPHCI-2DPAGE - Parasite host cell interaction 2D-PAGE database, at Department of Medical Microbioloy and Immunology, University of Aarhus, Denmark http://www.gram.au.dk/cgi-bin/get-2d-entry?Swiss-Prot accession number(AC)
Example: http://www.gram.au.dk/cgi-bin/get-2d-entry?P11142