Attention: World-2DPAGE is no longer maintained.
WORLD-2DPAGE Links
How to link to 2-D PAGE databases indexed in the WORLD-2DPAGE List
This page contains references to known federated 2-D PAGE database servers, and examples of how to link to specific entry of these databases. For a full list of 2-D PAGE database servers, as well as to 2-D PAGE related servers and services, please refer to the WORLD-2DPAGE List.
Database | How to link | |
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Multi species | ||
SWISS-2DPAGE (Swiss Institute of Bioinformatics) |
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WORLD-2DPAGE Repository (Swiss Institute of Bioinformatics) | Linking to WORLD-2DPAGE Repository can be done the same way as with SWISS-2DPAGE. You should only replace /swiss-2dpage/ by /repository/. Example: http://world-2dpage.expasy.org/repository/P08499 You may limit your linking to a specific database from the Repository, by adding the argument database={database ID} to your URL. Example: http://world-2dpage.expasy.org/repository/database=0001&ac=P08499 | |
SIENA-2DPAGE - 2D-PAGE database at Department of Molecular Biology, University of Siena, Italy | http://www.bio-mol.unisi.it/cgi-bin/2d/2d.cgi?Swiss-Prot accession number(AC) Example: http://www.bio-mol.unisi.it/cgi-bin/2d/2d.cgi?P01009 Linking can be done the same way as with SWISS-2DPAGE. | |
UCD 2D-PAGE - The UCD Conway Institute Proteome Research Centre (CIPRC), University College Dublin, Ireland | http://proteomics-portal.ucd.ie:8082/cgi-bin/2d/2d.cgi?Swiss-Prot accession number(AC) Example: http://proteomics-portal.ucd.ie:8082/cgi-bin/2d/2d.cgi?P49289 Linking can be done the same way as with SWISS-2DPAGE. | |
2-DE databases, at Max Planck Institute for Infection Biology, Berlin, Germany | European Bacteria Project: Chlamydia pneumoniae, Helicobacter pylori, Mycobacterium bovis and tuberculosis http://www.mpiib-berlin.mpg.de/mpiib-cgi/ebp-page/search.cgi?type=result&search=all&columns=NCBI.SWISS_PROT_AccNo&keywords=accession number(AC) Example: http://www.mpiib-berlin.mpg.de/mpiib-cgi/ebp-page/search.cgi?type=result&search=all&columns=NCBI.SWISS_PROT_AccNo&keywords=P31511 | |
Other microorganisms: Borrelia garinii, Francisella tularensis, Mycoplasma pneumoniae http://www.mpiib-berlin.mpg.de/mpiib-cgi/microorganisms/search.cgi?type=result&search=all&columns=NCBI.SWISS_PROT_AccNo&keywords=accession number(AC) Example: http://www.mpiib-berlin.mpg.de/mpiib-cgi/microorganisms/search.cgi?type=result&search=all&columns=NCBI.SWISS_PROT_AccNo&keywords=P94798 | ||
Other organisms: Human Jurkat T-cells, Mouse mammary gland http://www.mpiib-berlin.mpg.de/mpiib-cgi/organisms/search.cgi?type=result&search=all&columns=NCBI.SWISS_PROT_AccNo&keywords=accession number(AC) Example: http://www.mpiib-berlin.mpg.de/mpiib-cgi/organisms/search.cgi?type=result&search=all&columns=NCBI.SWISS_PROT_AccNo&keywords=P07724 | ||
Mammalia | ||
DOSAC-COBS 2D-PAGE - University of Palermo, Italy | http://www.dosac.unipa.it/cgi-bin/2d/2d.cgi?ac=Swiss-Prot accession number(AC) Example: http://www.dosac.unipa.it/cgi-bin/2d/2d.cgi?ac=P00352 Linking can be done the same way as with SWISS-2DPAGE. | |
HEART-2DPAGE (German Heart Institute Berlin) | http://userpage.chemie.fu-berlin.de/cgi-bin/dhzb/findlink/~pleiss/protein_all.html?search=Swiss-Prot accession number(AC) or keyword Example: http://userpage.chemie.fu-berlin.de/cgi-bin/dhzb/findlink/~pleiss/protein_all.html?search=P04270 | |
RAT HEART-2DPAGE (German Heart Institute Berlin) | http://www.mpiib-berlin.mpg.de/mpiib-cgi/RAT-HEART/2d-search-ac?Swiss-Prot accession number(AC) Example: http://www.mpiib-berlin.mpg.de/mpiib-cgi/RAT-HEART/2d-search-ac?P15999 | |
HSC-2DPAGE(Heart Science Centre, Harefield Hospital) | http://www.doc.ic.ac.uk/vip/hsc-2dpage/cgi/allsearch.cgi/HAREFIELD-2DPAGE?Swiss-Prot accession number(AC) Example: http://www.doc.ic.ac.uk/vip/hsc-2dpage/cgi/allsearch.cgi/HAREFIELD-2DPAGE?P49289 | |
USC-OGP 2-DE database - University of Santiago de Compostela (USC), ES | http://usc_ogp_2ddatabase.cesga.es/cgi-bin/2d/2d.cgi?ac=Swiss-Prot accession number(AC) Example: http://usc_ogp_2ddatabase.cesga.es/cgi-bin/2d/2d.cgi?ac=P42655 | |
Peroxisomal 2D-PAGE - Upsala University, Sweden | http://www.sbc.su.se/~jia/2D/cgi-bin/2d/2d.cgi?ac=GI accession number Example: http://www.sbc.su.se/~jia/2D/cgi-bin/2d/2d.cgi?ac=GI.10092608 | |
PPDB - PhosphoProtein DataBase | http://www-lecb.ncifcrf.gov/cgi-bin/dbEngine?phosphoDB,getDataByID,Swiss-Prot accession number(AC) or ppDB ID # Example: http://www-lecb.ncifcrf.gov/cgi-bin/dbEngine?phosphoDB,getDataByID,P26645 | |
REPRODUCTION-2DPAGE (Nanjing Medical University, PR. China) | http://reprod.njmu.edu.cn/cgi-bin/2d/2d.cgi?Swiss-Prot accession number(AC) Example: http://reprod.njmu.edu.cn/cgi-bin/2d/2d.cgi?P01009 Linking can be done the same way as with SWISS-2DPAGE. | |
Toothprint (2-DE gels of dental tissues - University of Otago, Dunedin, New Zealand) | http://biocadmin.otago.ac.nz/tooth/FMPro?-db=toothprint.fm&-format=toothdb.htm&AC=Swiss-Prot accession number(AC)&-find Example: http://biocadmin.otago.ac.nz:591/tooth/FMPro?-db=toothprint.fm&-format=toothdb.htm&AC=P11427&-find | |
Washington University Inner Ear Protein Database | http://medicine.wustl.edu/cgi/AT-InnerEarsearch.cgi?search=Swiss-Prot accession number(AC) or keyword Example: http://medicine.wustl.edu/cgi/AT-InnerEarsearch.cgi?search=P01009 | |
Yeast | ||
YPM - Yeast Protein Map at Institut de Biochimie et Génétique Cellulaires, Bordeaux, France | http://www.ibgc.u-bordeaux2.fr/cgi-bin/getspot?YPM spot number Example: http://www.ibgc.u-bordeaux2.fr/cgi-bin/getspot?B49B25 | |
Other Eukaryota | ||
KAIKO 2DDB - the Silkworm-2DPAGE (various organs, tissues at various developmental stages) from National Institute of Agrobiological Sciences, Japan | http://kaiko2ddb.dna.affrc.go.jp/cgi-bin/search_2DDB.cgi?ac=KAIKO accession number&database=KAIKO database name Example: http://kaiko2ddb.dna.affrc.go.jp/cgi-bin/search_2DDB.cgi?ac=MGV3-F-017&database=midgut/female Linking can be done the same way as with SWISS-2DPAGE and World-2DPAGE Repository. | |
Archaea, Bacteria, Viruses and Parasites | ||
2DBase-Ecoli - A 2D-PAGE Database of Escherichia coli (various growing conditions) at University of Bielefeld - Fermentation Engineering Group (AGFT), Germany | http://2dbase.techfak.uni-bielefeld.de/cgi-bin/2d/2d.cgi?ac=Swiss-Prot accession number(AC) Example: http://2dbase.techfak.uni-bielefeld.de/cgi-bin/2d/2d.cgi?ac=P0A6N1 Linking can be done the same way as with SWISS-2DPAGE. | |
PHCI-2DPAGE - Parasite host cell interaction 2D-PAGE database, at Department of Medical Microbioloy and Immunology, University of Aarhus, Denmark | http://www.gram.au.dk/cgi-bin/get-2d-entry?Swiss-Prot accession number(AC) Example: http://www.gram.au.dk/cgi-bin/get-2d-entry?P11142 |