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Searching in 'World-2DPAGE Repository [0003]' for entry matching: P10795




World-2DPAGE Repository (0003):  P10795

P10795


General information about the entry
View entry in simple text format
Entry nameRBS1A_ARATH
Primary accession numberP10795
Secondary accession number(s) Q94JW2
integrated into World-2DPAGE Repository (0003) on October 14, 2008 (release 1)
2D Annotations were last modified onMay 18, 2011 (version 2)
General Annotations were last modified on November 15, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Ribulose bisphosphate carboxylase small chain 1A, chloroplastic; Short=RuBisCO small subunit 1A; EC=4.1.1.39; Flags: Precursor;.
Gene nameName=RBCS-1A
Synonyms=ATS1A
OrderedLocusNames=At1g67090
ORFNames=F5A8.1, F1O19.14
Annotated speciesArabidopsis thaliana (Mouse-ear cress) [TaxID: 3702]
TaxonomyEukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core; eudicotyledons; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
References
[1]   MAPPING ON GEL
PubMed=18656559; DOI=10.1016/j.jprot.2008.06.012; [NCBI, EBI, Israel, Japan]
Maldonado A.M., Echevarria-Zomeno S., Jean-Baptiste S., Hernandez M., Jorrin-Novo J.V.
''Evaluation of three different protocols of protein extraction for Arabidopsis thaliana leaf proteome analysis by two-dimensional electrophoresis''
J. Proteomics 71(4):461-472 (2008)
2D PAGE maps for identified proteins
How to interpret a protein

PHENOL_2 {Phenol 2}
Arabidopsis thaliana (Mouse-ear cress)
Tissue: Leaf
PHENOL_2
  map experimental info 		 
PHENOL_2

MAP LOCATIONS:
pI=6.76; Mw=14340  [identification data]

IDENTIFICATION: SPOT 70: SeqCov=72%. Mascot (Protein score/CI%=380/100, Total ion score/CI%=240/100) [1].
MAPPING (identification):
SPOT 70: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].



TCA-ACETONE_3 {TCA-Acetone 3}
Arabidopsis thaliana (Mouse-ear cress)
Tissue: Leaf
TCA-ACETONE_3
  map experimental info 		 
TCA-ACETONE_3

MAP LOCATIONS:
pI=6.76; Mw=14340  [identification data]

IDENTIFICATION: SPOT 70: SeqCov=72%. Mascot (Protein score/CI%=380/100, Total ion score/CI%=240/100) [1].
MAPPING (identification):
SPOT 70: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].



TCA-ACETONE-PHENOL_3 {TCA-Acetone-Phenol 3}
Arabidopsis thaliana (Mouse-ear cress)
Tissue: Leaf
TCA-ACETONE-PHENOL_3
  map experimental info 		 
TCA-ACETONE-PHENOL_3

MAP LOCATIONS:
pI=6.76; Mw=14340  [identification data]

IDENTIFICATION: SPOT 70: SeqCov=72%. Mascot (Protein score/CI%=380/100, Total ion score/CI%=240/100) [1].
MAPPING (identification):
SPOT 70: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Jesus V. Jorrin-Novo, University of Cordoba, Spain
Cross-references
UniProtKB/Swiss-ProtP10795; RBS1A_ARATH.
World-2DPAGE RepositoryP10795; RBS1A_ARATH.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameRBS1A_ARATH
Primary accession numberP10795
Secondary accession number(s) Q94JW2 Q9FPI6 Q9SAV4
Sequence was last modified on January 10, 2003 (version 2)
Annotations were last modified on October 19, 2011 (version 118)
Name and origin of the protein
DescriptionRecName: Full=Ribulose bisphosphate carboxylase small chain 1A, chloroplastic; Short=RuBisCO small subunit 1A; EC=4.1.1.39; Flags: Precursor;
Gene nameName=RBCS-1A
Synonyms=ATS1A
OrderedLocusNames=At1g67090
ORFNames=F5A8.1, F1O19.14
Encoded onName=RBCS-1A; Synonyms=ATS1A; OrderedLocusNames=At1g67090; ORFNames=F5A8.1, F1O19.14
KeywordsAlternative splicing; Calvin cycle; Carbon dioxide fixation; Chloroplast; Complete proteome; Lyase; Membrane; Monooxygenase; Oxidoreductase; Phosphoprotein; Photorespiration; Photosynthesis; Plastid; Reference proteome; Transit peptide.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLX13611; CAA31948.1; ALT_SEQ; Genomic_DNA
EMBLAC004146; AAD10655.1; -; Genomic_DNA
EMBLAC007152; -; NOT_ANNOTATED_CDS; Genomic_DNA
EMBLCP002684; AEE34594.1; -; Genomic_DNA
EMBLAF325011; AAG40363.1; -; mRNA
EMBLAF325004; AAG40356.1; -; mRNA
EMBLAF372874; AAK49590.1; ALT_INIT; mRNA
EMBLAF410291; AAK95277.1; -; mRNA
EMBLAY054188; AAL06849.1; -; mRNA
EMBLAY054581; AAK96772.1; -; mRNA
EMBLAY058831; AAL24219.1; -; mRNA
EMBLAY059940; AAL24422.1; -; mRNA
EMBLAY062612; AAL32690.1; -; mRNA
EMBLAY062711; AAL32789.1; -; mRNA
EMBLAY065101; AAL38277.1; -; mRNA
EMBLAY093380; AAM13379.1; -; mRNA
EMBLAY093388; AAM13387.1; -; mRNA
EMBLAY097366; AAM19882.1; -; mRNA
EMBLBT000362; AAN15681.1; -; mRNA
EMBLBT002076; AAN72087.1; -; mRNA
EMBLX68342; CAA48415.1; ALT_TERM; Other_DNA
IPIIPI00539020; -; .
PIRG96694; G96694; .
PIRS03720; RKMUA1; .
RefSeqNP_176880.1; NM_105379.3; .
UniGeneAt.12721; -; .
UniGeneAt.30194; -; .
UniGeneAt.46639; -; .
UniGeneAt.49098; -; .
UniGeneAt.67454; -; .
UniGeneAt.68122; -; .
UniGeneAt.70053; -; .
UniGeneAt.74991; -; .
UniGeneAt.75082; -; .
ProteinModelPortalP10795; -; .
SMRP10795; 56-178; .
IntActP10795; 2; .
MINTMINT-2584041; -; .
STRINGP10795; -; .
World-2DPAGE0003:P10795; -; .
PRIDEP10795; -; .
ProMEXP10795; -; .
EnsemblPlantsAT1G67090.1; AT1G67090.1; AT1G67090; .
GeneID843029; -; .
GenomeReviewsCT485782_GR; AT1G67090; .
KEGGath:AT1G67090; -; .
TAIRAt1g67090; -; .
eggNOGCOG4451; -; .
HOGENOMHBG608223; -; .
InParanoidP10795; -; .
OMAAFPATRK; -; .
ProtClustDBPLN02289; -; .
ArrayExpressP10795; -; .
GenevestigatorP10795; -; .
GOGO:0048046; C:apoplast; IDA:TAIR; .
GOGO:0031969; C:chloroplast membrane; IEA:UniProtKB-SubCell; .
GOGO:0009570; C:chloroplast stroma; IDA:TAIR; .
GOGO:0009535; C:chloroplast thylakoid membrane; IDA:TAIR; .
GOGO:0022626; C:cytosolic ribosome; IDA:TAIR; .
GOGO:0031977; C:thylakoid lumen; IDA:TAIR; .
GOGO:0005507; F:copper ion binding; IDA:TAIR; .
GOGO:0004497; F:monooxygenase activity; IEA:UniProtKB-KW; .
GOGO:0016984; F:ribulose-bisphosphate carboxylase activity; IEA:EC; .
GOGO:0009853; P:photorespiration; IEA:UniProtKB-KW; .
GOGO:0019253; P:reductive pentose-phosphate cycle; IEA:UniProtKB-KW; .
GOGO:0009637; P:response to blue light; IEP:TAIR; .
GOGO:0009409; P:response to cold; IEP:TAIR; .
GOGO:0010218; P:response to far red light; IEP:TAIR; .
GOGO:0010114; P:response to red light; IEP:TAIR; .
InterProIPR024681; RuBisCO_sc; .
InterProIPR000894; RuBisCO_sc_dom; .
InterProIPR024680; RuBisCO_ssu_N; .
Gene3DG3DSA:3.30.190.10; RuBisCO_small; 1; .
PfamPF12338; RbcS; 1; .
PfamPF00101; RuBisCO_small; 1; .
PRINTSPR00152; RUBISCOSMALL; .
SMARTSM00961; RuBisCO_small; 1; .
SUPFAMSSF55239; RuBisCO_small; 1; .


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World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server