resource logo

SWISS-2DPAGE

Attention: World-2DPAGE is no longer maintained.


SWISS-2DPAGE 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] 
[graphical interface]

     Select Remote Interfaces
[All Interfaces]
World-2DPAGE Portal
World-2DPAGE Repository

Exclude local DBs
has only effect if a remote
interface is selected
     

Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: P22203




SWISS-2DPAGE:  P22203


P22203


General information about the entry
View entry in simple text format
Entry nameVATE_YEAST
Primary accession numberP22203
integrated into SWISS-2DPAGE on February 1, 1995 (release 1)
2D Annotations were last modified onOctober 1, 2001 (version 1)
General Annotations were last modified on May 19, 2011 (version 12)
Name and origin of the protein
DescriptionRecName: Full=V-type proton ATPase subunit E; Short=V-ATPase subunit E; AltName: Full=V-ATPase 27 kDa subunit; AltName: Full=Vacuolar proton pump subunit E;.
Gene nameName=VMA4
Synonyms=VAT5
OrderedLocusNames=YOR332W
ORFNames=O6241
Annotated speciesSaccharomyces cerevisiae (Baker's yeast) [TaxID: 4932]
TaxonomyEukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces.
References
[1]   MAPPING ON GEL
MEDLINE=96314060; PubMed=8740180; [NCBI, Expasy, EBI, Israel, Japan]
Sanchez J.-C., Golaz O., Frutiger S., Schaller D., Appel R.D., Bairoch A., Hughes G.J., Hochstrasser D.F.
''''''The yeast SWISS-2DPAGE database'';'';''
Electrophoresis 17(1):556-565(1996)
[2]   MAPPING ON GEL
MEDLINE=95203288; PubMed=7895733; [NCBI, Expasy, EBI, Israel, Japan]
Garrels J.I., Futcher B., Kobayashi R., Latter G.I., Schwender B., Volpe T., Warner J.R., McLaughlin C.S.
''''''Protein identifications for a Saccharomyces cerevisiae protein database'';'';''
Electrophoresis 15(1):1466-1486(1994)
Comments
  • SUBUNIT: COMPOSED OF AT LEAST 10 SUBUNITS
2D PAGE maps for identified proteins
How to interpret a protein

YEAST {Saccharomyces cerevisiae}
Saccharomyces cerevisiae (Baker's yeast)
YEAST
  map experimental info
  protein estimated location
 
YEAST

MAP LOCATIONS:
pI=5.17; Mw=24316

MAPPING (identification):
GEL MATCHING [1] AND IDENTIFIED BY GARRELS [2].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtP22203; VATE_YEAST.
YEPD8272.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameVATE_YEAST
Primary accession numberP22203
Secondary accession number(s) D6W328
Sequence was last modified on January 23, 2007 (version 4)
Annotations were last modified on October 19, 2011 (version 115)
Name and origin of the protein
DescriptionRecName: Full=V-type proton ATPase subunit E; Short=V-ATPase subunit E; AltName: Full=V-ATPase 27 kDa subunit; AltName: Full=Vacuolar proton pump subunit E;
Gene nameName=VMA4
Synonyms=VAT5
OrderedLocusNames=YOR332W
ORFNames=O6241
Encoded onName=VMA4; Synonyms=VAT5; OrderedLocusNames=YOR332W; ORFNames=O6241
Keywords3D-structure; Acetylation; Coiled coil; Complete proteome; Direct protein sequencing; Hydrogen ion transport; Ion transport; Membrane; Phosphoprotein; Reference proteome; Transport; Vacuole.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLM60663; AAA35209.1; -; Genomic_DNA
EMBLZ49821; CAA89978.1; -; Genomic_DNA
EMBLZ75239; CAA99654.1; -; Genomic_DNA
EMBLBK006948; DAA11094.1; -; Genomic_DNA
PIRS62063; S62063; .
RefSeqNP_014977.1; NM_001183752.1; .
PDB2KZ9; NMR; -; A=3-69
PDBsum2KZ9; -; .
ProteinModelPortalP22203; -; .
SMRP22203; 1-69; 94-224; .
DIPDIP-4595N; -; .
IntActP22203; 64; .
MINTMINT-564623; -; .
STRINGP22203; -; .
TCDB3.A.2.2.3; H+- or Na+-translocating F-type; V-type and A-type ATPase (F-ATPase) superfamily; .
SWISS-2DPAGEP22203; -; .
PeptideAtlasP22203; -; .
EnsemblFungiYOR332W; YOR332W; YOR332W; .
GeneID854509; -; .
KEGGsce:YOR332W; -; .
NMPDRfig|4932.3.peg.6093; -; .
SGDS000005859; VMA4; .
eggNOGfuNOG09779; -; .
GeneTreeEFGT00050000005082; -; .
HOGENOMHBG525538; -; .
OMAQQRQKIM; -; .
OrthoDBEOG4RBTV4; -; .
PhylomeDBP22203; -; .
NextBio976864; -; .
ArrayExpressP22203; -; .
GenevestigatorP22203; -; .
GermOnlineYOR332W; Saccharomyces cerevisiae; .
GOGO:0000329; C:fungal-type vacuole membrane; TAS:SGD; .
GOGO:0000221; C:vacuolar proton-transporting V-type ATPase; V1 domain; IDA:SGD
GOGO:0005515; F:protein binding; IPI:IntAct; .
GOGO:0046961; F:proton-transporting ATPase activity; rotational mechanism; TAS:SGD
GOGO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro; .
GOGO:0007035; P:vacuolar acidification; TAS:SGD; .
InterProIPR002842; ATPase_V1/A1-cplx_esu; .
PfamPF01991; vATP-synt_E; 1; .



SWISS-2DPAGE image

SWISS-2DPAGE (search AC)


Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server