resource logo

SWISS-2DPAGE

Attention: World-2DPAGE is no longer maintained.


SWISS-2DPAGE 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] 
[graphical interface]

     Select Remote Interfaces
[All Interfaces]
World-2DPAGE Portal
World-2DPAGE Repository

Exclude local DBs
has only effect if a remote
interface is selected
     

Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: P25857




SWISS-2DPAGE:  P25857


P25857


General information about the entry
View entry in simple text format
Entry nameG3PB_ARATH
Primary accession numberP25857
integrated into SWISS-2DPAGE on December 1, 2000 (release 13)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on May 19, 2011 (version 9)
Name and origin of the protein
DescriptionRecName: Full=Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic; EC=1.2.1.13; AltName: Full=NADP-dependent glyceraldehydephosphate dehydrogenase subunit B; Flags: Precursor;.
Gene nameName=GAPB
OrderedLocusNames=At1g42970
ORFNames=F13A11.3
Annotated speciesArabidopsis thaliana (Mouse-ear cress) [TaxID: 3702]
TaxonomyEukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core; eudicotyledons; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
References
[1]   MAPPING ON GEL
Sarazin B., Tonella L., Marques K., Paesano S., Chane-Favre L., Sanchez J.-C., Hochstrasser D.F., Thiellement H.
Submitted (OCT-2000) to SWISS-2DPAGE
Comments
  • MISCELLANEOUS: POSSIBLE BINDING WITH COFACTOR
2D PAGE maps for identified proteins
How to interpret a protein

ARABIDOPSIS {Arabidopsis thaliana}
Arabidopsis thaliana (Mouse-ear cress)
Tissue: Leaf
ARABIDOPSIS
  map experimental info
  protein estimated location
 
ARABIDOPSIS

MAP LOCATIONS:
pI=5.23; Mw=42958  [identification data]

MAPPING (identification):
MASS SPECTROMETRY [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtP25857; G3PB_ARATH.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameG3PB_ARATH
Primary accession numberP25857
Secondary accession number(s) Q9C7S2
Sequence was last modified on May 2, 2002 (version 2)
Annotations were last modified on October 19, 2011 (version 116)
Name and origin of the protein
DescriptionRecName: Full=Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic; EC=1.2.1.13; AltName: Full=NADP-dependent glyceraldehydephosphate dehydrogenase subunit B; Flags: Precursor;
Gene nameName=GAPB
OrderedLocusNames=At1g42970
ORFNames=F13A11.3
Encoded onName=GAPB; OrderedLocusNames=At1g42970; ORFNames=F13A11.3
KeywordsCalvin cycle; Chloroplast; Complete proteome; Membrane; NADP; Oxidoreductase; Plastid; Reference proteome; Transit peptide.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLM64115; AAD10210.1; -; mRNA
EMBLM64118; AAA32795.1; -; Genomic_DNA
EMBLAC068324; AAG51517.1; -; Genomic_DNA
EMBLCP002684; AEE31933.1; -; Genomic_DNA
EMBLAY039961; AAK64065.1; -; mRNA
EMBLAY039539; AAK62594.1; -; mRNA
EMBLAY079402; AAL85133.1; -; mRNA
EMBLAY095991; AAM19948.1; -; mRNA
EMBLAY140091; AAM98232.1; -; mRNA
EMBLBT002267; AAN72278.1; -; mRNA
IPIIPI00541680; -; .
PIRC96497; C96497; .
PIRJQ1286; JQ1286; .
RefSeqNP_174996.1; NM_103456.3; .
UniGeneAt.21749; -; .
UniGeneAt.67261; -; .
ProteinModelPortalP25857; -; .
SMRP25857; 81-422; .
IntActP25857; 1; .
STRINGP25857; -; .
SWISS-2DPAGEP25857; -; .
PRIDEP25857; -; .
ProMEXP25857; -; .
EnsemblPlantsAT1G42970.1; AT1G42970.1; AT1G42970; .
GeneID840895; -; .
GenomeReviewsCT485782_GR; AT1G42970; .
KEGGath:AT1G42970; -; .
TAIRAt1g42970; -; .
eggNOGKOG0657; -; .
HOGENOMHBG571736; -; .
InParanoidP25857; -; .
OMAIGRNAFK; -; .
PhylomeDBP25857; -; .
ProtClustDBPLN02237; -; .
BRENDA1.2.1.13; 399; .
ArrayExpressP25857; -; .
GenevestigatorP25857; -; .
GermOnlineAT1G42970; Arabidopsis thaliana; .
GOGO:0048046; C:apoplast; IDA:TAIR; .
GOGO:0031969; C:chloroplast membrane; IEA:UniProtKB-SubCell; .
GOGO:0009570; C:chloroplast stroma; IDA:TAIR; .
GOGO:0009535; C:chloroplast thylakoid membrane; IDA:TAIR; .
GOGO:0010319; C:stromule; IDA:TAIR; .
GOGO:0004365; F:glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity; NAS:TAIR; .
GOGO:0047100; F:glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity; IEA:EC; .
GOGO:0051287; F:NAD binding; IEA:InterPro; .
GOGO:0006006; P:glucose metabolic process; IEA:InterPro; .
GOGO:0019253; P:reductive pentose-phosphate cycle; NAS:TAIR; .
GOGO:0046686; P:response to cadmium ion; IEP:TAIR; .
GOGO:0009409; P:response to cold; IEP:TAIR; .
GOGO:0009416; P:response to light stimulus; IEP:TAIR; .
GOGO:0009744; P:response to sucrose stimulus; IEP:TAIR; .
InterProIPR020831; GlycerAld/Erythrose_P_DH; .
InterProIPR020830; GlycerAld_3-P_DH_AS; .
InterProIPR020829; GlycerAld_3-P_DH_cat; .
InterProIPR020828; GlycerAld_3-P_DH_NAD(P)-bd; .
InterProIPR006424; Glyceraldehyde-3-P_DH_1; .
InterProIPR016040; NAD(P)-bd_dom; .
InterProIPR003823; Unk_CP12; .
Gene3DG3DSA:3.40.50.720; NAD(P)-bd; 1; .
PANTHERPTHR10836; GAP_DH; 1; .
PfamPF02672; CP12; 1; .
PfamPF02800; Gp_dh_C; 1; .
PfamPF00044; Gp_dh_N; 1; .
PRINTSPR00078; G3PDHDRGNASE; .
SMARTSM00846; Gp_dh_N; 1; .
TIGRFAMsTIGR01534; GAPDH-I; 1; .
PROSITEPS00071; GAPDH; 1; .



SWISS-2DPAGE image

SWISS-2DPAGE (search AC)


Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server