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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: Q9H9Y2




SWISS-2DPAGE:  Q9H9Y2


Q9H9Y2


General information about the entry
View entry in simple text format
Entry nameRPF1_HUMAN
Primary accession numberQ9H9Y2
integrated into SWISS-2DPAGE on May 15, 2003 (release 16)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on May 19, 2011 (version 6)
Name and origin of the protein
DescriptionRecName: Full=Ribosome production factor 1; AltName: Full=Brix domain-containing protein 5; AltName: Full=Ribosome biogenesis protein RPF1;.
Gene nameName=RPF1
Synonyms=BXDC5
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   MAPPING ON GEL
PubMed=12429849; [NCBI, Expasy, EBI, Israel, Japan]
Scherl A., Coute Y., Deon C., Calle A., Kindbeiter K., Sanchez J.-C., Greco A., Hochstrasser D.F., Diaz J.-J.
''''''Functional proteomic analysis of human nucleolus'';'';''
Mol. Biol. Cell. 13(1):4100-4109(2002)
2D PAGE maps for identified proteins
How to interpret a protein

NUCLEOLI_HELA_1D_HUMAN {SDS-PAGE of nucleolar proteins from Human HeLa cells}
Homo sapiens (Human)
Tissue: Cervix carcinoma
NUCLEOLI_HELA_1D_HUMAN
  map experimental info
  protein estimated location
 
NUCLEOLI_HELA_1D_HUMAN

MAP LOCATIONS:
Mw=46437  [identification data]

MAPPING (identification):
Tandem mass spectrometry [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtQ9H9Y2; RPF1_HUMAN.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameRPF1_HUMAN
Primary accession numberQ9H9Y2
Secondary accession number(s) Q5VSK7 Q6AHX1 Q8WXZ8
Sequence was last modified on July 19, 2005 (version 2)
Annotations were last modified on October 19, 2011 (version 79)
Name and origin of the protein
DescriptionRecName: Full=Ribosome production factor 1; AltName: Full=Brix domain-containing protein 5; AltName: Full=Ribosome biogenesis protein RPF1;
Gene nameName=RPF1
Synonyms=BXDC5
Encoded onName=RPF1; Synonyms=BXDC5
KeywordsComplete proteome; Nucleus; Polymorphism; Reference proteome; Ribosome biogenesis; RNA-binding; rRNA processing; rRNA-binding.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLAF322053; AAL37236.1; -; mRNA
EMBLAK022537; BAB14086.1; -; mRNA
EMBLAL359762; CAH70204.1; -; Genomic_DNA
EMBLAL844170; CAH70204.1; JOINED; Genomic_DNA
EMBLAL844170; CAH71914.1; -; Genomic_DNA
EMBLAL359762; CAH71914.1; JOINED; Genomic_DNA
EMBLAL844170; CAH71915.1; ALT_SEQ; Genomic_DNA
EMBLBC016051; AAH16051.1; -; mRNA
EMBLCR627468; CAH10670.1; -; mRNA
EMBLAL359584; CAH10671.1; -; mRNA
IPIIPI00292221; -; .
PIRT50616; T50616; .
RefSeqNP_079341.2; NM_025065.6; .
UniGeneHs.481202; -; .
ProteinModelPortalQ9H9Y2; -; .
STRINGQ9H9Y2; -; .
PhosphoSiteQ9H9Y2; -; .
SWISS-2DPAGEQ9H9Y2; -; .
PRIDEQ9H9Y2; -; .
EnsemblENST00000370654; ENSP00000359688; ENSG00000117133; .
GeneID80135; -; .
KEGGhsa:80135; -; .
UCSCuc001djv.2; human; .
CTD80135; -; .
GeneCardsGC01P083055; -; .
H-InvDBHIX0000736; -; .
HGNCHGNC:30350; RPF1; .
HPAHPA024642; -; .
neXtProtNX_Q9H9Y2; -; .
PharmGKBPA142672542; -; .
PharmGKBPA165752348; -; .
eggNOGprNOG05647; -; .
GeneTreeENSGT00550000074691; -; .
HOGENOMHBG601536; -; .
HOVERGENHBG083559; -; .
InParanoidQ9H9Y2; -; .
OMAEDRKIPN; -; .
OrthoDBEOG40VVQ0; -; .
PhylomeDBQ9H9Y2; -; .
NextBio70391; -; .
ArrayExpressQ9H9Y2; -; .
BgeeQ9H9Y2; -; .
CleanExHS_BXDC5; -; .
GenevestigatorQ9H9Y2; -; .
GermOnlineENSG00000117133; Homo sapiens; .
GOGO:0005730; C:nucleolus; IDA:UniProtKB; .
GOGO:0004812; F:aminoacyl-tRNA ligase activity; IEA:InterPro; .
GOGO:0005524; F:ATP binding; IEA:InterPro; .
GOGO:0019843; F:rRNA binding; IEA:UniProtKB-KW; .
GOGO:0006364; P:rRNA processing; IEA:UniProtKB-KW; .
InterProIPR004154; Anticodon-bd; .
InterProIPR007109; Brix; .
PfamPF04427; Brix; 1; .
SMARTSM00879; Brix; 1; .
SUPFAMSSF52954; Anticodon_bd; 1; .
PROSITEPS50833; BRIX; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server