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SWISS-2DPAGE

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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: ATPA_MOUSE




SWISS-2DPAGE:  ATPA_MOUSE


ATPA_MOUSE


General information about the entry
View entry in simple text format
Entry nameATPA_MOUSE
Primary accession numberQ03265
integrated into SWISS-2DPAGE on June 30, 1999 (release 10)
2D Annotations were last modified onOctober 1, 2001 (version 3)
General Annotations were last modified on May 19, 2011 (version 9)
Name and origin of the protein
DescriptionRecName: Full=ATP synthase subunit alpha, mitochondrial; Flags: Precursor;.
Gene nameName=Atp5a1
Annotated speciesMus musculus (Mouse) [TaxID: 10090]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus.
References
[1]   MAPPING ON GEL
PubMed=11680894; [NCBI, Expasy, EBI, Israel, Japan]
Sanchez J.-C., Chiappe D., Converset V., Hoogland C., Binz P.-A., Paesano S., Appel R.D., Wang S., Sennitt M., Nolan A., Cawthorne M.A., Hochstrasser D.F.
''''''The mouse SWISS-2DPAGE database: a tool for proteomics study of diabetes and obesity'';'';''
Proteomics 1(1):136-163(2001)
[2]   MAPPING ON GEL
PubMed=11503206; [NCBI, Expasy, EBI, Israel, Japan]
Lanne B., Potthast F., Hoglund A., Brockenhuus Von Lowenhielm H., Nystrom A.-C., Nilsson F., Dahllof B.
''''''Thiourea enhances mapping of the proteome from murine white adipose tissue'';'';''
Proteomics 1(1):819-828(2001)
[3]   MAPPING ON GEL
Tonella L., Hoogland C., Sanchez J.-C.
Submitted (OCT-2001) to SWISS-2DPAGE
2D PAGE maps for identified proteins
How to interpret a protein

ISLETS_MOUSE {Pancreatic islet cells}
Mus musculus (Mouse)
Tissue: Pancreatic islet
ISLETS_MOUSE
  map experimental info
  protein estimated location
 
ISLETS_MOUSE

MAP LOCATIONS:
pI=7.30; Mw=54887  [identification data]
pI=7.43; Mw=55038  [identification data]

MAPPING (identification):
Peptide mass fingerprinting [1].



MUSCLE_MOUSE {Gastrocnemius muscle}
Mus musculus (Mouse)
Tissue: Gastrocnemius
MUSCLE_MOUSE
  map experimental info
  protein estimated location
 
MUSCLE_MOUSE

MAP LOCATIONS:
pI=7.55; Mw=50806  [identification data]

MAPPING (identification):
Peptide mass fingerprinting [1].



WAT_MOUSE {White adipose tissue}
Mus musculus (Mouse)
Tissue: White adipose tissue
WAT_MOUSE
  map experimental info
  protein estimated location
 
WAT_MOUSE

MAP LOCATIONS:
pI=7.59; Mw=58443
pI=6.54; Mw=41280

MAPPING (identification):
GEL MATCHING [3] WITH WAT_MOUSE 2-DE MAP FROM LANNE ET AL. [2].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
REPRODUCTION-2DPAGEQ03265; Q03265.
REPRODUCTION-2DPAGEIPI00130280; IPI00130280.
UCD-2DPAGEQ03265; ATPA_MOUSE.
UniProtKB/Swiss-ProtQ03265; ATPA_MOUSE.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameATPA_MOUSE
Primary accession numberQ03265
Secondary accession number(s) Q3TFN0 Q3THN8 Q3TPR0 Q3TPV3 Q3TZU3 Q3UIR7 Q543Y6
Sequence was last modified on October 1, 1993 (version 1)
Annotations were last modified on September 21, 2011 (version 128)
Name and origin of the protein
DescriptionRecName: Full=ATP synthase subunit alpha, mitochondrial; Flags: Precursor;
Gene nameName=Atp5a1
Encoded onName=Atp5a1
KeywordsAcetylation; ATP synthesis; ATP-binding; Cell membrane; CF(1); Complete proteome; Direct protein sequencing; Hydrogen ion transport; Ion transport; Membrane; Mitochondrion; Mitochondrion inner membrane; Nucleotide-binding; Phosphoprotein; Pyrrolidone carboxylic acid; Reference proteome; Transit peptide; Transport.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLL01062; AAA37271.1; -; mRNA
EMBLAK043976; BAC31722.1; -; mRNA
EMBLAK076572; BAC36399.1; -; mRNA
EMBLAK146797; BAE27439.1; -; mRNA
EMBLAK150426; BAE29549.1; -; mRNA
EMBLAK150843; BAE29901.1; -; mRNA
EMBLAK151004; BAE30027.1; -; mRNA
EMBLAK151128; BAE30136.1; -; mRNA
EMBLAK151224; BAE30216.1; -; mRNA
EMBLAK151920; BAE30798.1; -; mRNA
EMBLAK152054; BAE30910.1; -; mRNA
EMBLAK152890; BAE31573.1; -; mRNA
EMBLAK157529; BAE34114.1; -; mRNA
EMBLAK159540; BAE35167.1; -; mRNA
EMBLAK159491; BAE35125.1; -; mRNA
EMBLAK159758; BAE35349.1; -; mRNA
EMBLAK160043; BAE35585.1; -; mRNA
EMBLAK164110; BAE37632.1; -; mRNA
EMBLAK164193; BAE37675.1; -; mRNA
EMBLAK166709; BAE38962.1; -; mRNA
EMBLAK166812; BAE39039.1; -; mRNA
EMBLAK167159; BAE39300.1; -; mRNA
EMBLAK167863; BAE39881.1; -; mRNA
EMBLAK168198; BAE40158.1; -; mRNA
EMBLAK168617; BAE40482.1; -; mRNA
EMBLAK168879; BAE40697.1; -; mRNA
EMBLAK168890; BAE40707.1; -; mRNA
EMBLAK168932; BAE40744.1; -; mRNA
EMBLAK169080; BAE40864.1; -; mRNA
EMBLAK169084; BAE40868.1; -; mRNA
EMBLAK169105; BAE40887.1; -; mRNA
EMBLAK169142; BAE40921.1; -; mRNA
EMBLAK169300; BAE41056.1; -; mRNA
EMBLAK169308; BAE41063.1; -; mRNA
EMBLAK169414; BAE41160.1; -; mRNA
EMBLBC014854; AAH14854.1; -; mRNA
IPIIPI00130280; -; .
PIRJC1473; JC1473; .
RefSeqNP_031531.1; NM_007505.2; .
UniGeneMm.276137; -; .
ProteinModelPortalQ03265; -; .
SMRQ03265; 56-552; .
IntActQ03265; 6; .
STRINGQ03265; -; .
PhosphoSiteQ03265; -; .
SWISS-2DPAGEQ03265; -; .
REPRODUCTION-2DPAGEIPI00130280; -; .
REPRODUCTION-2DPAGEQ03265; -; .
UCD-2DPAGEQ03265; -; .
PRIDEQ03265; -; .
EnsemblENSMUST00000026495; ENSMUSP00000026495; ENSMUSG00000025428; .
GeneID11946; -; .
KEGGmmu:11946; -; .
UCSCuc008fru.1; mouse; .
CTD498; -; .
MGIMGI:88115; Atp5a1; .
eggNOGroNOG06697; -; .
GeneTreeENSGT00550000074846; -; .
HOVERGENHBG001536; -; .
InParanoidQ03265; -; .
OMAQKRWNNG; -; .
OrthoDBEOG4ZCT48; -; .
PhylomeDBQ03265; -; .
NextBio280057; -; .
ArrayExpressQ03265; -; .
BgeeQ03265; -; .
GenevestigatorQ03265; -; .
GermOnlineENSMUSG00000025428; Mus musculus; .
GOGO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell; .
GOGO:0005524; F:ATP binding; IMP:MGI; .
GOGO:0046933; F:hydrogen ion transporting ATP synthase activity; rotational mechanism; IMP:MGI
GOGO:0046961; F:proton-transporting ATPase activity; rotational mechanism; IEA:InterPro
GOGO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro; .
GOGO:0015986; P:ATP synthesis coupled proton transport; IEA:InterPro; .
GOGO:0009790; P:embryo development; IMP:MGI; .
GOGO:0006629; P:lipid metabolic process; IMP:MGI; .
InterProIPR020003; ATPase_a/bsu_AS; .
InterProIPR005294; ATPase_F1-cplx_asu; .
InterProIPR018118; ATPase_F1/A1-cplx_a/bsu_N; .
InterProIPR023366; ATPase_F1/A1-cplx_a_su_N; .
InterProIPR000793; ATPase_F1/V1/A1-cplx_a/bsu_C; .
InterProIPR004100; ATPase_F1/V1/A1-cplx_a/bsu_N; .
InterProIPR000194; ATPase_F1/V1/A1_a/bsu_nucl-bd; .
Gene3DG3DSA:2.40.30.20; G3DSA:2.40.30.20; 1; .
PfamPF00006; ATP-synt_ab; 1; .
PfamPF00306; ATP-synt_ab_C; 1; .
PfamPF02874; ATP-synt_ab_N; 1; .
SUPFAMSSF47917; ATPase_a/b_C; 1; .
SUPFAMSSF50615; ATPase_a/b_N; 1; .
TIGRFAMsTIGR00962; AtpA; 1; .
PROSITEPS00152; ATPASE_ALPHA_BETA; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server