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SWISS-2DPAGE

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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: CP20C_ARATH




SWISS-2DPAGE:  CP20C_ARATH


CP20C_ARATH


General information about the entry
View entry in simple text format
Entry nameCP20C_ARATH
Primary accession numberP34791
integrated into SWISS-2DPAGE on December 1, 2000 (release 13)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on May 19, 2011 (version 9)
Name and origin of the protein
DescriptionRecName: Full=Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic; Short=PPIase CYP20-3; EC=5.2.1.8; AltName: Full=Cyclophilin of 20 kDa 3; AltName: Full=Cyclosporin A-binding protein; AltName: Full=Rotamase CYP20-3; AltName: Full=Rotamase cyclophilin-4; Flags: Precursor;.
Gene nameName=CYP20-3
Synonyms=ROC4
OrderedLocusNames=At3g62030
ORFNames=F21F14.200
Annotated speciesArabidopsis thaliana (Mouse-ear cress) [TaxID: 3702]
TaxonomyEukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core; eudicotyledons; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
References
[1]   MAPPING ON GEL
Sarazin B., Tonella L., Marques K., Paesano S., Chane-Favre L., Sanchez J.-C., Hochstrasser D.F., Thiellement H.
Submitted (OCT-2000) to SWISS-2DPAGE
2D PAGE maps for identified proteins
How to interpret a protein

ARABIDOPSIS {Arabidopsis thaliana}
Arabidopsis thaliana (Mouse-ear cress)
Tissue: Leaf
ARABIDOPSIS
  map experimental info
  protein estimated location
 
ARABIDOPSIS

MAP LOCATIONS:
pI=5.43; Mw=21513  [identification data]
pI=5.26; Mw=21689  [identification data]

MAPPING (identification):
MASS SPECTROMETRY [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtP34791; CP20C_ARATH.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameCP20C_ARATH
Primary accession numberP34791
Secondary accession number(s) Q8LBZ9 Q9FPH5
Sequence was last modified on February 1, 1994 (version 1)
Annotations were last modified on September 21, 2011 (version 101)
Name and origin of the protein
DescriptionRecName: Full=Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic; Short=PPIase CYP20-3; EC=5.2.1.8; AltName: Full=Cyclophilin of 20 kDa 3; AltName: Full=Cyclosporin A-binding protein; AltName: Full=Rotamase CYP20-3; AltName: Full=Rotamase cyclophilin-4; Flags: Precursor;
Gene nameName=CYP20-3
Synonyms=ROC4
OrderedLocusNames=At3g62030
ORFNames=F21F14.200
Encoded onName=CYP20-3; Synonyms=ROC4; OrderedLocusNames=At3g62030; ORFNames=F21F14.200
KeywordsAlternative splicing; Chaperone; Chloroplast; Complete proteome; Cyclosporin; Direct protein sequencing; Disulfide bond; Isomerase; Plastid; Reference proteome; Rotamase; Transit peptide.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLL14845; AAA20048.1; -; mRNA
EMBLU42724; AAB96831.1; -; Genomic_DNA
EMBLAL138642; CAB71910.1; -; Genomic_DNA
EMBLCP002686; AEE80297.1; -; Genomic_DNA
EMBLAF325026; AAG40378.1; -; mRNA
EMBLAY059843; AAL24325.1; -; mRNA
EMBLAY093284; AAM13283.1; -; mRNA
EMBLAY086899; AAM63944.1; -; mRNA
IPIIPI00517879; -; .
PIRB53422; B53422; .
RefSeqNP_191762.1; NM_116068.4; .
UniGeneAt.24742; -; .
UniGeneAt.48797; -; .
ProteinModelPortalP34791; -; .
SMRP34791; 97-256; .
DIPDIP-32746N; -; .
IntActP34791; 3; .
STRINGP34791; -; .
SWISS-2DPAGEP34791; -; .
PRIDEP34791; -; .
ProMEXP34791; -; .
EnsemblPlantsAT3G62030.1; AT3G62030.1; AT3G62030; .
EnsemblPlantsAT3G62030.2; AT3G62030.2; AT3G62030; .
GeneID825376; -; .
GenomeReviewsBA000014_GR; AT3G62030; .
KEGGath:AT3G62030; -; .
NMPDRfig|3702.1.peg.17585; -; .
GeneFarm2619; 240; .
TAIRAt3g62030; -; .
eggNOGKOG0880; -; .
GeneTreeEPGT00070000028564; -; .
HOGENOMHBG610621; -; .
InParanoidP34791; -; .
OMAPWLDNRH; -; .
PhylomeDBP34791; -; .
ProtClustDBCLSN2684112; -; .
BRENDA5.2.1.8; 399; .
ArrayExpressP34791; -; .
GenevestigatorP34791; -; .
GermOnlineAT3G62030; Arabidopsis thaliana; .
GOGO:0048046; C:apoplast; IDA:TAIR; .
GOGO:0009941; C:chloroplast envelope; IDA:TAIR; .
GOGO:0009570; C:chloroplast stroma; IDA:TAIR; .
GOGO:0009535; C:chloroplast thylakoid membrane; IDA:TAIR; .
GOGO:0022626; C:cytosolic ribosome; IDA:TAIR; .
GOGO:0031977; C:thylakoid lumen; IDA:TAIR; .
GOGO:0042277; F:peptide binding; IEA:UniProtKB-KW; .
GOGO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IDA:TAIR; .
GOGO:0005515; F:protein binding; IPI:IntAct; .
GOGO:0019344; P:cysteine biosynthetic process; IMP:TAIR; .
GOGO:0042742; P:defense response to bacterium; IEP:TAIR; .
GOGO:0006457; P:protein folding; IEA:UniProtKB-KW; .
GOGO:0009737; P:response to abscisic acid stimulus; IEP:TAIR; .
GOGO:0009642; P:response to light intensity; IMP:TAIR; .
GOGO:0010555; P:response to mannitol stimulus; IMP:TAIR; .
GOGO:0006979; P:response to oxidative stress; IMP:TAIR; .
GOGO:0009651; P:response to salt stress; IMP:TAIR; .
InterProIPR015891; Cyclophilin-like; .
InterProIPR020892; Pep-Pro_Isoase_cyclophilin_CS; .
InterProIPR002130; PPIase_cyclophilin; .
Gene3DG3DSA:2.40.100.10; PPIase_cyclophilin; 1; .
PfamPF00160; Pro_isomerase; 1; .
PRINTSPR00153; CSAPPISMRASE; .
SUPFAMSSF50891; CSA_PPIase; 1; .
PROSITEPS00170; CSA_PPIASE_1; 1; .
PROSITEPS50072; CSA_PPIASE_2; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server