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SWISS-2DPAGE

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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: H2A1J_HUMAN




SWISS-2DPAGE:  H2A1J_HUMAN


H2A1J_HUMAN


General information about the entry
View entry in simple text format
Entry nameH2A1J_HUMAN
Primary accession numberP99059
integrated into SWISS-2DPAGE on November 9, 2001 (release 15)
2D Annotations were last modified onMarch 31, 2004 (version 2)
General Annotations were last modified on May 19, 2011 (version 7)
Name and origin of the protein
DescriptionRecName: Full=Histone H2A type 1-J; AltName: Full=Histone H2A/e;.
Gene nameName=HIST1H2AJ
Synonyms=H2AFE
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   MAPPING ON GEL
PubMed=12429849; [NCBI, Expasy, EBI, Israel, Japan]
Scherl A., Coute Y., Deon C., Calle A., Kindbeiter K., Sanchez J.-C., Greco A., Hochstrasser D.F., Diaz J.-J.
''''''Functional proteomic analysis of human nucleolus'';'';''
Mol. Biol. Cell. 13(1):4100-4109(2002)
[2]   MAPPING ON GEL
Vuadens F., Crettaz D., Telenti A., Quadroni M., Duchosal M.A., Schneider P., Tissot J.-D.
''''''New insights into HIV lymphocyte infection'';'';''
(IN) Sanchez J.-C., Corthals G.L., Hochstrasser D.F. (eds.)Biomedical Application of Proteomics, pp.245-262, Wiley-VCH, Weinheim (2004)
2D PAGE maps for identified proteins
How to interpret a protein

NUCLEOLI_HELA_1D_HUMAN {SDS-PAGE of nucleolar proteins from Human HeLa cells}
Homo sapiens (Human)
Tissue: Cervix carcinoma
NUCLEOLI_HELA_1D_HUMAN
  map experimental info
  protein estimated location
 
NUCLEOLI_HELA_1D_HUMAN

MAP LOCATIONS:
Mw=16883  [identification data]

MAPPING (identification):
Tandem mass spectrometry [1].



LYMPHOCYTE_HUMAN {Lymphocytes}
Homo sapiens (Human)
Tissue: Lymphocyte
LYMPHOCYTE_HUMAN
  map experimental info
  protein estimated location
 
LYMPHOCYTE_HUMAN

MAP LOCATIONS:
pI=5.16; Mw=16734  [identification data]

MAPPING (identification):
MALDI tandem mass spectrometry [2].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtQ99878; H2A1J_HUMAN.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameH2A1J_HUMAN
Primary accession numberQ99878
Secondary accession number(s) A2RUU6 Q5JXQ5
Sequence was last modified on January 23, 2007 (version 3)
Annotations were last modified on October 19, 2011 (version 113)
Name and origin of the protein
DescriptionRecName: Full=Histone H2A type 1-J; AltName: Full=Histone H2A/e;
Gene nameName=HIST1H2AJ
Synonyms=H2AFE
Encoded onName=HIST1H2AJ; Synonyms=H2AFE
KeywordsAcetylation; Chromosome; Citrullination; Complete proteome; DNA-binding; Isopeptide bond; Methylation; Nucleosome core; Nucleus; Phosphoprotein; Reference proteome; Ubl conjugation.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLZ83736; CAB06031.1; -; Genomic_DNA
EMBLAY131990; AAN59971.1; -; Genomic_DNA
EMBLAL049822; CAB81656.1; -; Genomic_DNA
EMBLCH471081; EAX03109.1; -; Genomic_DNA
EMBLBC066232; AAH66232.1; -; mRNA
EMBLBC066233; AAH66233.1; -; mRNA
EMBLBC066234; AAH66234.1; -; mRNA
EMBLBC066235; AAH66235.1; -; mRNA
EMBLBC066236; AAH66236.1; -; mRNA
EMBLBC066237; AAH66237.1; -; mRNA
EMBLBC133048; AAI33049.1; -; mRNA
EMBLBC133050; AAI33051.1; -; mRNA
IPIIPI00552873; -; .
RefSeqNP_066544.1; NM_021066.2; .
UniGeneHs.406691; -; .
UniGeneHs.558421; -; .
ProteinModelPortalQ99878; -; .
SMRQ99878; 14-119; .
STRINGQ99878; -; .
PhosphoSiteQ99878; -; .
SWISS-2DPAGEP99059; -; .
PRIDEQ99878; -; .
EnsemblENST00000333151; ENSP00000328484; ENSG00000182611; .
GeneID8331; -; .
KEGGhsa:8331; -; .
UCSCuc003njn.1; human; .
CTD8331; -; .
GeneCardsGC06M027591; -; .
H-InvDBHIX0032874; -; .
H-InvDBHIX0032914; -; .
H-InvDBHIX0184247; -; .
HGNCHGNC:4727; HIST1H2AJ; .
MIM602791; gene; .
neXtProtNX_Q99878; -; .
PharmGKBPA29104; -; .
GeneTreeENSGT00600000084241; -; .
HOGENOMHBG610736; -; .
HOVERGENHBG009342; -; .
InParanoidQ99878; -; .
OMAGRGKQGS; -; .
OrthoDBEOG4CC42V; -; .
OrthoDBEOG4TXBTD; -; .
PhylomeDBQ99878; -; .
ReactomeREACT_22172; Chromosome Maintenance; .
ReactomeREACT_27271; Meiotic Recombination; .
ReactomeREACT_75792; Meiotic Synapsis; .
ReactomeREACT_75925; Amyloids; .
NextBio31198; -; .
ArrayExpressQ99878; -; .
CleanExHS_HIST1H2AJ; -; .
GenevestigatorQ99878; -; .
GermOnlineENSG00000182611; Homo sapiens; .
GOGO:0000786; C:nucleosome; NAS:UniProtKB; .
GOGO:0005634; C:nucleus; IEA:UniProtKB-SubCell; .
GOGO:0003677; F:DNA binding; NAS:UniProtKB; .
GOGO:0006334; P:nucleosome assembly; NAS:UniProtKB; .
InterProIPR009072; Histone-fold; .
InterProIPR007125; Histone_core_D; .
InterProIPR002119; Histone_H2A; .
Gene3DG3DSA:1.10.20.10; Histone-fold; 1; .
PfamPF00125; Histone; 1; .
PRINTSPR00620; HISTONEH2A; .
SMARTSM00414; H2A; 1; .
SUPFAMSSF47113; Histone-fold; 1; .
PROSITEPS00046; HISTONE_H2A; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server