resource logo

SWISS-2DPAGE

Attention: World-2DPAGE is no longer maintained.


SWISS-2DPAGE 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] 
[graphical interface]

     Select Remote Interfaces
[All Interfaces]
World-2DPAGE Portal
World-2DPAGE Repository

Exclude local DBs
has only effect if a remote
interface is selected
     

Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: P38418




SWISS-2DPAGE:  P38418


P38418


General information about the entry
View entry in simple text format
Entry nameLOX2_ARATH
Primary accession numberP38418
integrated into SWISS-2DPAGE on December 1, 2000 (release 13)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on May 19, 2011 (version 9)
Name and origin of the protein
DescriptionRecName: Full=Lipoxygenase 2, chloroplastic; Short=AtLOX2; EC=1.13.11.12; Flags: Precursor;.
Gene nameName=LOX2
OrderedLocusNames=At3g45140
ORFNames=T14D3.80
Annotated speciesArabidopsis thaliana (Mouse-ear cress) [TaxID: 3702]
TaxonomyEukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core; eudicotyledons; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
References
[1]   MAPPING ON GEL
Sarazin B., Tonella L., Marques K., Paesano S., Chane-Favre L., Sanchez J.-C., Hochstrasser D.F., Thiellement H.
Submitted (OCT-2000) to SWISS-2DPAGE
2D PAGE maps for identified proteins
How to interpret a protein

ARABIDOPSIS {Arabidopsis thaliana}
Arabidopsis thaliana (Mouse-ear cress)
Tissue: Leaf
ARABIDOPSIS
  map experimental info
  protein estimated location
 
ARABIDOPSIS

MAP LOCATIONS:
pI=5.08; Mw=98398  [identification data]

MAPPING (identification):
MASS SPECTROMETRY [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtP38418; LOX2_ARATH.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameLOX2_ARATH
Primary accession numberP38418
Secondary accession number(s) Q0WLR8 Q56WG6 Q8GW45 Q8W4E4 Q9M1U5
Sequence was last modified on October 1, 1994 (version 1)
Annotations were last modified on September 21, 2011 (version 105)
Name and origin of the protein
DescriptionRecName: Full=Lipoxygenase 2, chloroplastic; Short=AtLOX2; EC=1.13.11.12; Flags: Precursor;
Gene nameName=LOX2
OrderedLocusNames=At3g45140
ORFNames=T14D3.80
Encoded onName=LOX2; OrderedLocusNames=At3g45140; ORFNames=T14D3.80
KeywordsChloroplast; Complete proteome; Cytoplasm; Dioxygenase; Fatty acid biosynthesis; Iron; Lipid synthesis; Metal-binding; Oxidoreductase; Oxylipin biosynthesis; Plastid; Reference proteome; Transit peptide.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLL23968; AAA32749.1; -; mRNA
EMBLAL138649; CAB72152.1; ALT_SEQ; Genomic_DNA
EMBLCP002686; AEE77997.1; -; Genomic_DNA
EMBLAY062611; AAL32689.1; -; mRNA
EMBLAK119093; BAC43666.1; -; mRNA
EMBLAK222075; BAD94917.1; -; mRNA
EMBLAK230124; BAF01939.1; -; mRNA
IPIIPI00548522; -; .
PIRJQ2391; JQ2391; .
PIRT47454; T47454; .
RefSeqNP_566875.1; NM_114383.2; .
UniGeneAt.22079; -; .
UniGeneAt.75027; -; .
ProteinModelPortalP38418; -; .
SMRP38418; 91-896; .
IntActP38418; 4; .
STRINGP38418; -; .
SWISS-2DPAGEP38418; -; .
PRIDEP38418; -; .
ProMEXP38418; -; .
EnsemblPlantsAT3G45140.1; AT3G45140.1; AT3G45140; .
GeneID823650; -; .
GenomeReviewsBA000014_GR; AT3G45140; .
KEGGath:AT3G45140; -; .
NMPDRfig|3702.1.peg.15728; -; .
TAIRAt3g45140; -; .
eggNOGeuNOG05471; -; .
GeneTreeEPGT00070000028098; -; .
HOGENOMHBG749429; -; .
InParanoidP38418; -; .
OMAYGGYFPN; -; .
PhylomeDBP38418; -; .
ProtClustDBCLSN2917374; -; .
ArrayExpressP38418; -; .
GenevestigatorP38418; -; .
GermOnlineAT3G45140; Arabidopsis thaliana; .
GOGO:0009941; C:chloroplast envelope; IDA:TAIR; .
GOGO:0009570; C:chloroplast stroma; IDA:TAIR; .
GOGO:0009535; C:chloroplast thylakoid membrane; IDA:TAIR; .
GOGO:0005506; F:iron ion binding; IEA:InterPro; .
GOGO:0016165; F:lipoxygenase activity; IDA:UniProtKB; .
GOGO:0005515; F:protein binding; IPI:IntAct; .
GOGO:0009695; P:jasmonic acid biosynthetic process; IMP:TAIR; .
GOGO:0009617; P:response to bacterium; IEP:UniProtKB; .
GOGO:0009620; P:response to fungus; IEP:TAIR; .
GOGO:0080027; P:response to herbivore; IEP:UniProtKB; .
GOGO:0009753; P:response to jasmonic acid stimulus; IEP:TAIR; .
GOGO:0009611; P:response to wounding; IEP:UniProtKB; .
InterProIPR008976; Lipase_LipOase; .
InterProIPR000907; LipOase; .
InterProIPR013819; LipOase_C; .
InterProIPR020834; LipOase_CS; .
InterProIPR020833; LipOase_Fe_BS; .
InterProIPR001024; LipOase_LH2; .
InterProIPR001246; LipOase_pln; .
Gene3DG3DSA:2.60.60.20; Lipase_LipOase; 1; .
PANTHERPTHR11771; LipOase; 1; .
PfamPF00305; Lipoxygenase; 1; .
PfamPF01477; PLAT; 1; .
PRINTSPR00087; LIPOXYGENASE; .
PRINTSPR00468; PLTLPOXGNASE; .
SMARTSM00308; LH2; 1; .
SUPFAMSSF49723; Lipase_LipOase; 1; .
SUPFAMSSF48484; Lipoxygenase; 1; .
PROSITEPS00711; LIPOXYGENASE_1; 1; .
PROSITEPS00081; LIPOXYGENASE_2; 1; .
PROSITEPS51393; LIPOXYGENASE_3; 1; .
PROSITEPS50095; PLAT; 1; .



SWISS-2DPAGE image

SWISS-2DPAGE (search AC)


Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server