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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: P42285




SWISS-2DPAGE:  P42285


P42285


General information about the entry
View entry in simple text format
Entry nameSK2L2_HUMAN
Primary accession numberP42285
integrated into SWISS-2DPAGE on November 9, 2001 (release 15)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on May 19, 2011 (version 7)
Name and origin of the protein
DescriptionRecName: Full=Superkiller viralicidic activity 2-like 2; EC=3.6.4.13; AltName: Full=ATP-dependent helicase SKIV2L2;.
Gene nameName=SKIV2L2
Synonyms=KIAA0052, Mtr4
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   MAPPING ON GEL
PubMed=12429849; [NCBI, ExPASy, EBI, Israel, Japan]
Scherl A., Coute Y., Deon C., Calle A., Kindbeiter K., Sanchez J.-C., Greco A., Hochstrasser D.F., Diaz J.-J.
''''''Functional proteomic analysis of human nucleolus'';'';''
Mol. Biol. Cell. 13(1):4100-4109(2002)
2D PAGE maps for identified proteins
How to interpret a protein

NUCLEOLI_HELA_1D_HUMAN {SDS-PAGE of nucleolar proteins from Human HeLa cells}
Homo sapiens (Human)
Tissue: Cervix carcinoma
NUCLEOLI_HELA_1D_HUMAN
  map experimental info
  protein estimated location
 
NUCLEOLI_HELA_1D_HUMAN

MAP LOCATIONS:
Mw=105656  [identification data]

MAPPING (identification):
Tandem mass spectrometry [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from license@isb-sib.ch).
Cross-references
UniProtKB/Swiss-ProtP42285; SK2L2_HUMAN.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameSK2L2_HUMAN
Primary accession numberP42285
Secondary accession number(s) Q2M386 Q6MZZ8 Q6P170 Q8N5R0 Q8TAG2
Sequence was last modified on July 19, 2005 (version 3)
Annotations were last modified on October 19, 2011 (version 119)
Name and origin of the protein
DescriptionRecName: Full=Superkiller viralicidic activity 2-like 2; EC=3.6.4.13; AltName: Full=ATP-dependent helicase SKIV2L2;
Gene nameName=SKIV2L2
Synonyms=KIAA0052, Mtr4
Encoded onName=SKIV2L2; Synonyms=KIAA0052, Mtr4
KeywordsAcetylation; ATP-binding; Complete proteome; Direct protein sequencing; Helicase; Hydrolase; mRNA processing; mRNA splicing; Nucleotide-binding; Nucleus; Polymorphism; Reference proteome; rRNA processing; Spliceosome.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLD29641; BAA06124.2; ALT_INIT; mRNA
EMBLBX640789; CAE45877.1; -; mRNA
EMBLBC014669; AAH14669.2; -; mRNA
EMBLBC028604; AAH28604.3; -; mRNA
EMBLBC031779; AAH31779.1; -; mRNA
EMBLBC065258; AAH65258.1; ALT_INIT; mRNA
EMBLBC104996; AAI04997.1; -; mRNA
EMBLBC113509; AAI13510.1; -; mRNA
IPIIPI00647217; -; .
RefSeqNP_056175.3; NM_015360.4; .
UniGeneHs.274531; -; .
ProteinModelPortalP42285; -; .
SMRP42285; 103-1041; .
IntActP42285; 11; .
STRINGP42285; -; .
PhosphoSiteP42285; -; .
SWISS-2DPAGEP42285; -; .
PeptideAtlasP42285; -; .
PRIDEP42285; -; .
EnsemblENST00000230640; ENSP00000230640; ENSG00000039123; .
GeneID23517; -; .
KEGGhsa:23517; -; .
UCSCuc003jpy.2; human; .
CTD23517; -; .
GeneCardsGC05P051576; -; .
H-InvDBHIX0004867; -; .
HGNCHGNC:18734; SKIV2L2; .
HPAHPA037379; -; .
neXtProtNX_P42285; -; .
PharmGKBPA134901921; -; .
eggNOGprNOG11763; -; .
GeneTreeENSGT00580000081543; -; .
HOGENOMHBG610926; -; .
HOVERGENHBG104255; -; .
InParanoidP42285; -; .
OMAEYMLERS; -; .
OrthoDBEOG4D52WW; -; .
PhylomeDBP42285; -; .
NextBio45957; -; .
ArrayExpressP42285; -; .
BgeeP42285; -; .
CleanExHS_SKIV2L2; -; .
GenevestigatorP42285; -; .
GermOnlineENSG00000039123; Homo sapiens; .
GOGO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB; .
GOGO:0005730; C:nucleolus; IEA:UniProtKB-SubCell; .
GOGO:0005524; F:ATP binding; IEA:UniProtKB-KW; .
GOGO:0008026; F:ATP-dependent helicase activity; IEA:InterPro; .
GOGO:0003676; F:nucleic acid binding; IEA:InterPro; .
GOGO:0005515; F:protein binding; IPI:IntAct; .
GOGO:0000460; P:maturation of 5.8S rRNA; IMP:UniProtKB; .
GOGO:0000398; P:nuclear mRNA splicing; via spliceosome; IC:UniProtKB
InterProIPR014001; DEAD-like_helicase; .
InterProIPR011545; DNA/RNA_helicase_DEAD/DEAH_N; .
InterProIPR012961; DSH_C; .
InterProIPR001650; Helicase_C; .
InterProIPR016438; RNA_helicase_ATP-dep_SK12/DOB1; .
PfamPF00270; DEAD; 1; .
PfamPF08148; DSHCT; 1; .
PfamPF00271; Helicase_C; 1; .
PIRSFPIRSF005198; Antiviral_helicase_SKI2; 1; .
SMARTSM00487; DEXDc; 1; .
SMARTSM00490; HELICc; 1; .
PROSITEPS51192; HELICASE_ATP_BIND_1; 1; .
PROSITEPS51194; HELICASE_CTER; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server