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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: P55769




SWISS-2DPAGE:  P55769


P55769


General information about the entry
View entry in simple text format
Entry nameNH2L1_HUMAN
Primary accession numberP55769
integrated into SWISS-2DPAGE on May 15, 2003 (release 16)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on May 19, 2011 (version 7)
Name and origin of the protein
DescriptionRecName: Full=NHP2-like protein 1; AltName: Full=High mobility group-like nuclear protein 2 homolog 1; AltName: Full=OTK27; AltName: Full=SNU13 homolog; Short=hSNU13; AltName: Full=U4/U6.U5 tri-snRNP 15.5 kDa protein;.
Gene nameName=NHP2L1
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   MAPPING ON GEL
PubMed=12429849; [NCBI, ExPASy, EBI, Israel, Japan]
Scherl A., Coute Y., Deon C., Calle A., Kindbeiter K., Sanchez J.-C., Greco A., Hochstrasser D.F., Diaz J.-J.
''''''Functional proteomic analysis of human nucleolus'';'';''
Mol. Biol. Cell. 13(1):4100-4109(2002)
2D PAGE maps for identified proteins
How to interpret a protein

NUCLEOLI_HELA_1D_HUMAN {SDS-PAGE of nucleolar proteins from Human HeLa cells}
Homo sapiens (Human)
Tissue: Cervix carcinoma
NUCLEOLI_HELA_1D_HUMAN
  map experimental info
  protein estimated location
 
NUCLEOLI_HELA_1D_HUMAN

MAP LOCATIONS:
Mw=16327  [identification data]
Mw=16078  [identification data]
Mw=15701  [identification data]

MAPPING (identification):
Tandem mass spectrometry [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from license@isb-sib.ch).
Cross-references
UniProtKB/Swiss-ProtP55769; NH2L1_HUMAN.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameNH2L1_HUMAN
Primary accession numberP55769
Sequence was last modified on January 23, 2007 (version 3)
Annotations were last modified on October 19, 2011 (version 122)
Name and origin of the protein
DescriptionRecName: Full=NHP2-like protein 1; AltName: Full=High mobility group-like nuclear protein 2 homolog 1; AltName: Full=OTK27; AltName: Full=SNU13 homolog; Short=hSNU13; AltName: Full=U4/U6.U5 tri-snRNP 15.5 kDa protein;
Gene nameName=NHP2L1
Encoded onName=NHP2L1
Keywords3D-structure; Acetylation; Complete proteome; Direct protein sequencing; mRNA processing; mRNA splicing; Nucleus; Polymorphism; Reference proteome; Ribonucleoprotein; RNA-binding; Spliceosome.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLD50420; BAA23363.1; -; mRNA
EMBLAF155235; AAF06959.1; -; mRNA
EMBLAF091076; AAC72945.1; -; mRNA
EMBLCR456531; CAG30417.1; -; mRNA
EMBLZ83840; CAB46207.1; -; Genomic_DNA
EMBLBC005358; AAH05358.1; -; mRNA
EMBLBC019282; AAH19282.1; -; mRNA
IPIIPI00026167; -; .
RefSeqNP_001003796.1; NM_001003796.1; .
RefSeqNP_004999.1; NM_005008.2; .
UniGeneHs.182255; -; .
PDB1E7K; X-ray; 2.90 A; A/B=1-128
PDB2JNB; NMR; -; A=1-128
PDB2OZB; X-ray; 2.60 A; A/D=1-128
PDB3SIU; X-ray; 2.63 A; A/D=1-128
PDB3SIV; X-ray; 3.30 A; A/D/G/J=1-128
PDBsum1E7K; -; .
PDBsum2JNB; -; .
PDBsum2OZB; -; .
PDBsum3SIU; -; .
PDBsum3SIV; -; .
ProteinModelPortalP55769; -; .
SMRP55769; 3-128; .
IntActP55769; 8; .
MINTMINT-1382515; -; .
STRINGP55769; -; .
PhosphoSiteP55769; -; .
SWISS-2DPAGEP55769; -; .
PeptideAtlasP55769; -; .
PRIDEP55769; -; .
EnsemblENST00000215956; ENSP00000215956; ENSG00000100138; .
EnsemblENST00000355257; ENSP00000347401; ENSG00000100138; .
EnsemblENST00000401959; ENSP00000383949; ENSG00000100138; .
GeneID4809; -; .
KEGGhsa:4809; -; .
UCSCuc003bat.1; human; .
CTD4809; -; .
GeneCardsGC22M025035; -; .
H-InvDBHIX0016527; -; .
HGNCHGNC:7819; NHP2L1; .
HPAHPA029199; -; .
MIM601304; gene; .
MIM601876; gene; .
neXtProtNX_P55769; -; .
PharmGKBPA31621; -; .
eggNOGprNOG20718; -; .
HOVERGENHBG000328; -; .
OrthoDBEOG4M91T0; -; .
PhylomeDBP55769; -; .
ReactomeREACT_1675; mRNA Processing; .
ReactomeREACT_71; Gene Expression; .
NextBio18532; -; .
ArrayExpressP55769; -; .
BgeeP55769; -; .
CleanExHS_NHP2L1; -; .
GenevestigatorP55769; -; .
GermOnlineENSG00000100138; Homo sapiens; .
GOGO:0031428; C:box C/D snoRNP complex; NAS:BHF-UCL; .
GOGO:0005654; C:nucleoplasm; TAS:Reactome; .
GOGO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW; .
GOGO:0005515; F:protein binding; IPI:BHF-UCL; .
GOGO:0003723; F:RNA binding; TAS:ProtInc; .
GOGO:0000398; P:nuclear mRNA splicing; via spliceosome; TAS:Reactome
GOGO:0042254; P:ribosome biogenesis; IEA:InterPro; .
InterProIPR002415; H/ACA_rnp_Nhp2_euk; .
InterProIPR004038; Ribosomal_L7Ae/L30e/S12e/Gad45; .
InterProIPR018492; Ribosomal_L7Ae/L8/Nhp2; .
InterProIPR004037; Ribosomal_L7Ae_CS; .
PfamPF01248; Ribosomal_L7Ae; 1; .
PRINTSPR00881; L7ARS6FAMILY; .
PRINTSPR00883; NUCLEARHMG; .
PROSITEPS01082; RIBOSOMAL_L7AE; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server