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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: P93819




SWISS-2DPAGE:  P93819


P93819


General information about the entry
View entry in simple text format
Entry nameMDHC1_ARATH
Primary accession numberP93819
integrated into SWISS-2DPAGE on December 1, 2000 (release 13)
2D Annotations were last modified onOctober 1, 2001 (version 1)
General Annotations were last modified on May 19, 2011 (version 6)
Name and origin of the protein
DescriptionRecName: Full=Malate dehydrogenase, cytoplasmic 1; EC=1.1.1.37;.
Gene nameOrderedLocusNames=At1g04410
ORFNames=F19P19.13
Annotated speciesArabidopsis thaliana (Mouse-ear cress) [TaxID: 3702]
TaxonomyEukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core; eudicotyledons; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
References
[1]   MAPPING ON GEL
Sarazin B., Tonella L., Marques K., Paesano S., Chane-Favre L., Sanchez J.-C., Hochstrasser D.F., Thiellement H.
Submitted (OCT-2000) to SWISS-2DPAGE
[2]   MAPPING ON GEL
MEDLINE=99155804; PubMed=10036779; [NCBI, ExPASy, EBI, Israel, Japan]
Santoni V., Rouquie D., Doumas P., Mansion M., Boutry M., Degand H., Dupree P., Packman L., Sherrier J., Prime T., Bauw G., Posada E., Rouze P., Dehais P., Sahnoun I., Barlier I., Rossignol M.
''''''Use of a proteome strategy for tagging proteins present at the plasma membrane'';'';''
Plant J. 16(1):633-641(1998)
2D PAGE maps for identified proteins
How to interpret a protein

ARABIDOPSIS {Arabidopsis thaliana}
Arabidopsis thaliana (Mouse-ear cress)
Tissue: Leaf
ARABIDOPSIS
  map experimental info
  protein estimated location
 
ARABIDOPSIS

MAP LOCATIONS:
pI=5.90; Mw=38674

MAPPING (identification):
GEL MATCHING [1] WITH 2-D MAP OF LEAF SOLUBLE PROTEINS FROM PPMdb DATABASE (GHENT, BELGIUM) [2].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from license@isb-sib.ch).
Cross-references
UniProtKB/Swiss-ProtP93819; MDHC1_ARATH.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameMDHC1_ARATH
Primary accession numberP93819
Sequence was last modified on January 1, 1998 (version 2)
Annotations were last modified on October 19, 2011 (version 111)
Name and origin of the protein
DescriptionRecName: Full=Malate dehydrogenase, cytoplasmic 1; EC=1.1.1.37;
Gene nameOrderedLocusNames=At1g04410
ORFNames=F19P19.13
Encoded onOrderedLocusNames=At1g04410; ORFNames=F19P19.13
KeywordsComplete proteome; Cytoplasm; Isopeptide bond; NAD; Oxidoreductase; Phosphoprotein; Reference proteome; Tricarboxylic acid cycle; Ubl conjugation.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLAC000104; AAB70434.1; -; Genomic_DNA
EMBLCP002684; AEE27694.1; -; Genomic_DNA
EMBLAY050374; AAK91392.1; -; mRNA
EMBLAY065134; AAL38310.1; -; mRNA
EMBLAY081563; AAM10125.1; -; mRNA
EMBLAY133655; AAM91485.1; -; mRNA
EMBLAY088023; AAM65569.1; -; mRNA
IPIIPI00518864; -; .
PIRB86176; B86176; .
RefSeqNP_171936.1; NM_100321.2; .
UniGeneAt.11041; -; .
UniGeneAt.47261; -; .
ProteinModelPortalP93819; -; .
SMRP93819; 4-332; .
IntActP93819; 4; .
STRINGP93819; -; .
SWISS-2DPAGEP93819; -; .
PRIDEP93819; -; .
ProMEXP93819; -; .
EnsemblPlantsAT1G04410.1; AT1G04410.1; AT1G04410; .
GeneID839527; -; .
GenomeReviewsCT485782_GR; AT1G04410; .
KEGGath:AT1G04410; -; .
NMPDRfig|3702.1.peg.587; -; .
TAIRAt1g04410; -; .
eggNOGKOG1496; -; .
HOGENOMHBG289884; -; .
InParanoidP93819; -; .
OMANFSAMTR; -; .
PhylomeDBP93819; -; .
ProtClustDBPLN00135; -; .
ArrayExpressP93819; -; .
GenevestigatorP93819; -; .
GOGO:0048046; C:apoplast; IDA:TAIR; .
GOGO:0009570; C:chloroplast stroma; IDA:TAIR; .
GOGO:0005634; C:nucleus; IDA:TAIR; .
GOGO:0005886; C:plasma membrane; IDA:TAIR; .
GOGO:0009506; C:plasmodesma; IDA:TAIR; .
GOGO:0005774; C:vacuolar membrane; IDA:TAIR; .
GOGO:0005488; F:binding; IEA:InterPro; .
GOGO:0030060; F:L-malate dehydrogenase activity; IEA:EC; .
GOGO:0044262; P:cellular carbohydrate metabolic process; IEA:InterPro; .
GOGO:0006108; P:malate metabolic process; IEA:InterPro; .
GOGO:0046686; P:response to cadmium ion; IEP:TAIR; .
GOGO:0009651; P:response to salt stress; IEP:TAIR; .
GOGO:0010043; P:response to zinc ion; IEP:TAIR; .
GOGO:0006099; P:tricarboxylic acid cycle; IEA:UniProtKB-KW; .
InterProIPR001557; L-lactate/malate_DH; .
InterProIPR022383; Lactate/malate_DH_C; .
InterProIPR001236; Lactate/malate_DH_N; .
InterProIPR015955; Lactate_DH/Glyco_Ohase_4_C; .
InterProIPR001252; Malate_DH_AS; .
InterProIPR011274; Malate_DH_NAD-dep_euk; .
InterProIPR010945; Malate_DH_type2; .
InterProIPR016040; NAD(P)-bd_dom; .
Gene3DG3DSA:3.90.110.10; lact_mal_DH; 1; .
Gene3DG3DSA:3.40.50.720; NAD(P)-bd; 1; .
PANTHERPTHR23382; MDH_SF1; 1; .
PfamPF02866; Ldh_1_C; 1; .
PfamPF00056; Ldh_1_N; 1; .
PIRSFPIRSF000102; Lac_mal_DH; 1; .
SUPFAMSSF56327; Lactate_DH/Glyco_hydro_4_C; 1; .
TIGRFAMsTIGR01759; MalateDH-SF1; 1; .
TIGRFAMsTIGR01758; MDH_euk_cyt; 1; .
PROSITEPS00068; MDH; 1; .



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