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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: Q02878




SWISS-2DPAGE:  Q02878


Q02878


General information about the entry
View entry in simple text format
Entry nameRL6_HUMAN
Primary accession numberQ02878
integrated into SWISS-2DPAGE on November 9, 2001 (release 15)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on May 19, 2011 (version 7)
Name and origin of the protein
DescriptionRecName: Full=60S ribosomal protein L6; AltName: Full=Neoplasm-related protein C140; AltName: Full=Tax-responsive enhancer element-binding protein 107; Short=TaxREB107;.
Gene nameName=RPL6
Synonyms=TXREB1
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   MAPPING ON GEL
PubMed=12429849; [NCBI, ExPASy, EBI, Israel, Japan]
Scherl A., Coute Y., Deon C., Calle A., Kindbeiter K., Sanchez J.-C., Greco A., Hochstrasser D.F., Diaz J.-J.
''''''Functional proteomic analysis of human nucleolus'';'';''
Mol. Biol. Cell. 13(1):4100-4109(2002)
2D PAGE maps for identified proteins
How to interpret a protein

NUCLEOLI_HELA_1D_HUMAN {SDS-PAGE of nucleolar proteins from Human HeLa cells}
Homo sapiens (Human)
Tissue: Cervix carcinoma
NUCLEOLI_HELA_1D_HUMAN
  map experimental info
  protein estimated location
 
NUCLEOLI_HELA_1D_HUMAN

MAP LOCATIONS:
Mw=36076  [identification data]

MAPPING (identification):
Tandem mass spectrometry [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from license@isb-sib.ch).
Cross-references
UniProtKB/Swiss-ProtQ02878; RL6_HUMAN.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameRL6_HUMAN
Primary accession numberQ02878
Secondary accession number(s) Q2M3Q3 Q8WW97
Sequence was last modified on January 23, 2007 (version 3)
Annotations were last modified on October 19, 2011 (version 125)
Name and origin of the protein
DescriptionRecName: Full=60S ribosomal protein L6; AltName: Full=Neoplasm-related protein C140; AltName: Full=Tax-responsive enhancer element-binding protein 107; Short=TaxREB107;
Gene nameName=RPL6
Synonyms=TXREB1
Encoded onName=RPL6; Synonyms=TXREB1
KeywordsAcetylation; Complete proteome; Direct protein sequencing; Phosphoprotein; Polymorphism; Reference proteome; Ribonucleoprotein; Ribosomal protein.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLX69391; CAA49188.1; -; mRNA
EMBLD17554; BAA04491.1; -; mRNA
EMBLAB042820; BAB17292.1; -; Genomic_DNA
EMBLBC004138; AAH04138.1; -; mRNA
EMBLBC020679; AAH20679.1; -; mRNA
EMBLBC032299; AAH32299.1; -; mRNA
EMBLBC071912; AAH71912.1; -; mRNA
EMBLBC104824; AAI04825.1; -; mRNA
EMBLBC104826; AAI04827.1; -; mRNA
EMBLS71022; AAB30819.1; -; mRNA
IPIIPI00790342; -; .
PIRI51803; I51803; .
PIRS33714; S33714; .
RefSeqNP_000961.2; NM_000970.3; .
RefSeqNP_001019833.1; NM_001024662.1; .
UniGeneHs.528668; -; .
UniGeneHs.546283; -; .
ProteinModelPortalQ02878; -; .
SMRQ02878; 44-288; .
DIPDIP-27547N; -; .
IntActQ02878; 8; .
MINTMINT-1159780; -; .
STRINGQ02878; -; .
PhosphoSiteQ02878; -; .
SWISS-2DPAGEQ02878; -; .
PRIDEQ02878; -; .
EnsemblENST00000202773; ENSP00000202773; ENSG00000089009; .
EnsemblENST00000424576; ENSP00000403172; ENSG00000089009; .
GeneID6128; -; .
KEGGhsa:6128; -; .
UCSCuc001ttu.1; human; .
CTD6128; -; .
H-InvDBHIX0011009; -; .
HGNCHGNC:10362; RPL6; .
MIM603703; gene; .
neXtProtNX_Q02878; -; .
PharmGKBPA34758; -; .
eggNOGprNOG04593; -; .
HOVERGENHBG002565; -; .
InParanoidQ02878; -; .
OMAKYELTEQ; -; .
OrthoDBEOG4W0XDZ; -; .
PhylomeDBQ02878; -; .
ReactomeREACT_13698; Regulation of beta-cell development; .
ReactomeREACT_15380; Diabetes pathways; .
ReactomeREACT_17015; Metabolism of proteins; .
ReactomeREACT_1762; 3' -UTR-mediated translational regulation; .
ReactomeREACT_21257; Metabolism of RNA; .
ReactomeREACT_6167; Influenza Infection; .
ReactomeREACT_71; Gene Expression; .
NextBio23799; -; .
ArrayExpressQ02878; -; .
CleanExHS_RPL6; -; .
GenevestigatorQ02878; -; .
GermOnlineENSG00000089009; Homo sapiens; .
GOGO:0022625; C:cytosolic large ribosomal subunit; TAS:ProtInc; .
GOGO:0003677; F:DNA binding; TAS:ProtInc; .
GOGO:0003723; F:RNA binding; TAS:ProtInc; .
GOGO:0003735; F:structural constituent of ribosome; TAS:ProtInc; .
GOGO:0031018; P:endocrine pancreas development; TAS:Reactome; .
GOGO:0016071; P:mRNA metabolic process; TAS:Reactome; .
GOGO:0006355; P:regulation of transcription; DNA-dependent; TAS:ProtInc
GOGO:0006414; P:translational elongation; TAS:Reactome; .
GOGO:0006415; P:translational termination; TAS:Reactome; .
GOGO:0019083; P:viral transcription; TAS:Reactome; .
InterProIPR005568; Ribosomal_L6_N; .
InterProIPR000915; Ribosomal_L6E; .
InterProIPR014722; Transl_SH3-like_sub; .
Gene3DG3DSA:2.30.30.30; Ribosomal_L2; 1; .
PANTHERPTHR10715; Ribosomal_L6E; 1; .
PfamPF01159; Ribosomal_L6e; 1; .
PfamPF03868; Ribosomal_L6e_N; 1; .
PROSITEPS01170; RIBOSOMAL_L6E; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server