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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: Q38799




SWISS-2DPAGE:  Q38799


Q38799


General information about the entry
View entry in simple text format
Entry nameODPB_ARATH
Primary accession numberQ38799
integrated into SWISS-2DPAGE on December 1, 2000 (release 13)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on May 19, 2011 (version 9)
Name and origin of the protein
DescriptionRecName: Full=Pyruvate dehydrogenase E1 component subunit beta, mitochondrial; Short=PDHE1-B; EC=1.2.4.1; Flags: Precursor;.
Gene nameName=PDH2
OrderedLocusNames=At5g50850
ORFNames=K16E14.1
Annotated speciesArabidopsis thaliana (Mouse-ear cress) [TaxID: 3702]
TaxonomyEukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core; eudicotyledons; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
References
[1]   MAPPING ON GEL
Sarazin B., Tonella L., Marques K., Paesano S., Chane-Favre L., Sanchez J.-C., Hochstrasser D.F., Thiellement H.
Submitted (OCT-2000) to SWISS-2DPAGE
2D PAGE maps for identified proteins
How to interpret a protein

ARABIDOPSIS {Arabidopsis thaliana}
Arabidopsis thaliana (Mouse-ear cress)
Tissue: Leaf
ARABIDOPSIS
  map experimental info
  protein estimated location
 
ARABIDOPSIS

MAP LOCATIONS:
pI=5.25; Mw=35689  [identification data]

MAPPING (identification):
MASS SPECTROMETRY [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtQ38799; ODPB_ARATH.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameODPB_ARATH
Primary accession numberQ38799
Secondary accession number(s) Q9LSM8
Sequence was last modified on June 6, 2002 (version 2)
Annotations were last modified on September 21, 2011 (version 105)
Name and origin of the protein
DescriptionRecName: Full=Pyruvate dehydrogenase E1 component subunit beta, mitochondrial; Short=PDHE1-B; EC=1.2.4.1; Flags: Precursor;
Gene nameName=PDH2
OrderedLocusNames=At5g50850
ORFNames=K16E14.1
Encoded onName=PDH2; OrderedLocusNames=At5g50850; ORFNames=K16E14.1
KeywordsComplete proteome; Glycolysis; Isopeptide bond; Mitochondrion; Oxidoreductase; Pyruvate; Reference proteome; Thiamine pyrophosphate; Transit peptide; Ubl conjugation.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLU09137; AAA52225.1; -; mRNA
EMBLAB026637; BAA98121.1; -; Genomic_DNA
EMBLCP002688; AED96001.1; -; Genomic_DNA
EMBLAY070728; AAL50070.1; -; mRNA
EMBLBT000839; AAN38676.1; -; mRNA
IPIIPI00538502; -; .
RefSeqNP_199898.1; NM_124463.3; .
UniGeneAt.24270; -; .
ProteinModelPortalQ38799; -; .
SMRQ38799; 35-357; .
STRINGQ38799; -; .
SWISS-2DPAGEQ38799; -; .
PRIDEQ38799; -; .
EnsemblPlantsAT5G50850.1; AT5G50850.1; AT5G50850; .
GeneID835157; -; .
GenomeReviewsBA000015_GR; AT5G50850; .
KEGGath:AT5G50850; -; .
NMPDRfig|3702.1.peg.26947; -; .
GeneFarm2003; -; .
TAIRAt5g50850; -; .
eggNOGKOG0524; -; .
HOGENOMHBG753264; -; .
InParanoidQ38799; -; .
OMAMEHAFDY; -; .
PhylomeDBQ38799; -; .
ProtClustDBPLN02683; -; .
ArrayExpressQ38799; -; .
GenevestigatorQ38799; -; .
GermOnlineAT5G50850; Arabidopsis thaliana; .
GOGO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell; .
GOGO:0005730; C:nucleolus; IDA:TAIR; .
GOGO:0005774; C:vacuolar membrane; IDA:TAIR; .
GOGO:0004739; F:pyruvate dehydrogenase (acetyl-transferring) activity; IEA:EC; .
GOGO:0042742; P:defense response to bacterium; IEP:TAIR; .
GOGO:0006096; P:glycolysis; IEA:UniProtKB-KW; .
InterProIPR009014; Transketo_C/Pyr-ferredox_oxred; .
InterProIPR015941; Transketolase-like_C; .
InterProIPR005475; Transketolase-like_Pyr-bd; .
InterProIPR005476; Transketolase_C; .
Gene3DG3DSA:3.40.50.920; Transketo_C_like; 1; .
PfamPF02779; Transket_pyr; 1; .
PfamPF02780; Transketolase_C; 1; .
SMARTSM00861; Transket_pyr; 1; .
SUPFAMSSF52922; Transketo_C_like; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server