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SWISS-2DPAGE

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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: RSSA_MOUSE




SWISS-2DPAGE:  RSSA_MOUSE


RSSA_MOUSE


General information about the entry
View entry in simple text format
Entry nameRSSA_MOUSE
Primary accession numberP14206
integrated into SWISS-2DPAGE on September 1, 1998 (release 7)
2D Annotations were last modified onMay 15, 2003 (version 2)
General Annotations were last modified on May 19, 2011 (version 12)
Name and origin of the protein
DescriptionRecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor; Short=37LRP; AltName: Full=37 kDa oncofetal antigen; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein p40; Short=LBP/p40; AltName: Full=OFA/iLRP;.
Gene nameName=Rpsa
Synonyms=Lamr1, P40-8
Annotated speciesMus musculus (Mouse) [TaxID: 10090]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus.
References
[1]   MAPPING ON GEL
MEDLINE=96154592; PubMed=8586073; [NCBI, Expasy, EBI, Israel, Japan]
Anderson N.L., Esquer-Blasco R., Hoffmann J.-P., Meheus L., Raymackers J., Steiner S., Witzmann F., Anderson N.G.
''''''An updated two-dimensional gel database of rat liver proteins useful in gene regulation and drug effect studies'';'';''
Electrophoresis 16(1):1977-1981(1995)
[2]   MAPPING ON GEL
PubMed=11680894; [NCBI, Expasy, EBI, Israel, Japan]
Sanchez J.-C., Chiappe D., Converset V., Hoogland C., Binz P.-A., Paesano S., Appel R.D., Wang S., Sennitt M., Nolan A., Cawthorne M.A., Hochstrasser D.F.
''''''The mouse SWISS-2DPAGE database: a tool for proteomics study of diabetes and obesity'';'';''
Proteomics 1(1):136-163(2001)
2D PAGE maps for identified proteins
How to interpret a protein

ISLETS_MOUSE {Pancreatic islet cells}
Mus musculus (Mouse)
Tissue: Pancreatic islet
ISLETS_MOUSE
  map experimental info
  protein estimated location
 
ISLETS_MOUSE

MAP LOCATIONS:
pI=4.91; Mw=44505  [identification data]

MAPPING (identification):
Peptide mass fingerprinting [2].



LIVER_MOUSE {Liver}
Mus musculus (Mouse)
Tissue: Liver
LIVER_MOUSE
  map experimental info
  protein estimated location
 
LIVER_MOUSE

MAP LOCATIONS:
pI=4.85; Mw=40894

MAPPING (identification):
MATCHING [2] WITH ANDERSON MOUSE AND RAT LIVER 2-DE MAPS [1].



MUSCLE_MOUSE {Gastrocnemius muscle}
Mus musculus (Mouse)
Tissue: Gastrocnemius
MUSCLE_MOUSE
  map experimental info
  protein estimated location
 
MUSCLE_MOUSE

MAP LOCATIONS:
pI=4.84; Mw=42583

MAPPING (identification):
MATCHING WITH THE MOUSE LIVER MASTER GEL [2].



WAT_MOUSE {White adipose tissue}
Mus musculus (Mouse)
Tissue: White adipose tissue
WAT_MOUSE
  map experimental info
  protein estimated location
 
WAT_MOUSE

MAP LOCATIONS:
pI=4.91; Mw=41076

MAPPING (identification):
MATCHING WITH THE MOUSE LIVER MASTER GEL [2].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
PMMA-2DPAGEP14206.
REPRODUCTION-2DPAGEP14206; P14206.
REPRODUCTION-2DPAGEIPI00123604; IPI00123604.
UniProtKB/Swiss-ProtP14206; RSSA_MOUSE.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameRSSA_MOUSE
Primary accession numberP14206
Secondary accession number(s) Q58E74 Q8BHL0 Q8BNL2 Q91V31 Q9CY13
Sequence was last modified on May 1, 2007 (version 4)
Annotations were last modified on October 19, 2011 (version 113)
Name and origin of the protein
DescriptionRecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37 kDa oncofetal antigen; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40; AltName: Full=OFA/iLRP;
Gene nameName=Rpsa
Synonyms=Lamr1, P40-8
Encoded onName=Rpsa; Synonyms=Lamr1, P40-8
KeywordsAcetylation; Cell membrane; Complete proteome; Cytoplasm; Direct protein sequencing; Membrane; Nucleus; Phosphoprotein; Receptor; Reference proteome; Repeat; Ribonucleoprotein; Ribosomal protein.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLJ02870; AAA39413.1; -; mRNA
EMBLX06406; CAA29696.1; -; mRNA
EMBLAF140348; AAD26866.1; -; mRNA
EMBLDQ360291; ABC95972.1; -; Genomic_DNA
EMBLDQ360292; ABC95977.1; -; Genomic_DNA
EMBLAK010423; BAB26926.1; -; mRNA
EMBLAK010985; BAB27306.1; -; mRNA
EMBLAK011041; BAB27353.1; -; mRNA
EMBLAK011043; BAB27355.1; -; mRNA
EMBLAK075778; BAC35952.1; -; mRNA
EMBLAK075790; BAC35960.1; -; mRNA
EMBLAK082935; BAC38701.1; -; mRNA
EMBLAK088954; BAC40671.1; -; mRNA
EMBLAK134224; BAE22057.1; -; mRNA
EMBLAK135488; BAE22550.1; -; mRNA
EMBLAK160551; BAE35867.1; -; mRNA
EMBLAK160625; BAE35924.1; -; mRNA
EMBLAK165219; BAE38083.1; -; mRNA
EMBLAK166697; BAE38953.1; -; mRNA
EMBLAK166874; BAE39085.1; -; mRNA
EMBLAK167132; BAE39278.1; -; mRNA
EMBLBC003829; AAH03829.1; -; mRNA
EMBLBC037195; AAH37195.1; -; mRNA
EMBLBC055886; AAH55886.1; -; mRNA
EMBLBC081461; AAH81461.1; -; mRNA
EMBLBC084677; AAH84677.1; -; mRNA
EMBLBC092041; AAH92041.1; -; mRNA
EMBLBC094902; AAH94902.1; -; mRNA
EMBLBC099601; AAH99601.1; -; mRNA
EMBLBC110285; AAI10286.1; -; mRNA
IPIIPI00123604; -; .
PIRA29395; A29395; .
RefSeqNP_035159.3; NM_011029.4; .
RefSeqXP_003086186.1; XM_003086138.1; .
UniGeneMm.311972; -; .
UniGeneMm.391708; -; .
UniGeneMm.4071; -; .
ProteinModelPortalP14206; -; .
SMRP14206; 2-238; .
IntActP14206; 4; .
STRINGP14206; -; .
PhosphoSiteP14206; -; .
SWISS-2DPAGEP14206; -; .
PMMA-2DPAGEP14206; -; .
REPRODUCTION-2DPAGEIPI00123604; -; .
REPRODUCTION-2DPAGEP14206; -; .
PRIDEP14206; -; .
EnsemblENSMUST00000035105; ENSMUSP00000035105; ENSMUSG00000032518; .
GeneID100505031; -; .
GeneID16785; -; .
KEGGmmu:100505031; -; .
KEGGmmu:16785; -; .
NMPDRfig|10090.3.peg.21048; -; .
UCSCuc009scd.2; mouse; .
CTD3921; -; .
MGIMGI:105381; Rpsa; .
eggNOGroNOG10954; -; .
GeneTreeENSGT00390000015036; -; .
HOGENOMHBG736296; -; .
HOVERGENHBG054466; -; .
InParanoidP14206; -; .
OMATDAQAIK; -; .
OrthoDBEOG40ZQZ6; -; .
PhylomeDBP14206; -; .
NextBio458801; -; .
ArrayExpressP14206; -; .
BgeeP14206; -; .
CleanExMM_RPSA; -; .
GenevestigatorP14206; -; .
GermOnlineENSMUSG00000032518; Mus musculus; .
GOGO:0030686; C:90S preribosome; ISS:RefGenome; .
GOGO:0022627; C:cytosolic small ribosomal subunit; ISS:RefGenome; .
GOGO:0005634; C:nucleus; IEA:UniProtKB-SubCell; .
GOGO:0005886; C:plasma membrane; ISS:UniProtKB; .
GOGO:0043236; F:laminin binding; IDA:MGI; .
GOGO:0004872; F:receptor activity; IEA:UniProtKB-KW; .
GOGO:0003735; F:structural constituent of ribosome; ISS:RefGenome; .
GOGO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA; 5.8S rRNA; LSU-rRNA)
ISS:RefGenome.
GOGO:0000461; P:endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA; 5.8S rRNA; LSU-rRNA)
ISS:RefGenome.
GOGO:0000028; P:ribosomal small subunit assembly; ISS:RefGenome; .
GOGO:0006407; P:rRNA export from nucleus; ISS:RefGenome; .
GOGO:0006412; P:translation; ISS:RefGenome; .
InterProIPR001865; Ribosomal_S2; .
InterProIPR018130; Ribosomal_S2_CS; .
InterProIPR005707; Ribosomal_S2_euk/arc; .
InterProIPR023591; Ribosomal_S2_flav_dom; .
PANTHERPTHR11489; Ribosomal_S2_e/a; 1; .
PfamPF00318; Ribosomal_S2; 1; .
PRINTSPR00395; RIBOSOMALS2; .
SUPFAMSSF52313; Ribosomal_S2; 1; .
TIGRFAMsTIGR01012; Sa_S2_E_A; 1; .
PROSITEPS00962; RIBOSOMAL_S2_1; 1; .
PROSITEPS00963; RIBOSOMAL_S2_2; 1; .



SWISS-2DPAGE image

SWISS-2DPAGE (search AC)


Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server