Due to maintenance work, this service will not be available Thursday August 21st between 7am and 8am CEST.
World-2DPAGE Home


SWISS-2DPAGE 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] 
[graphical interface]

     Select Remote Interfaces
[All Interfaces]
World-2DPAGE Portal
World-2DPAGE Repository

Exclude local DBs
has only effect if a remote
interface is selected
     

Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: TALB_ECOLI




SWISS-2DPAGE:  TALB_ECOLI


TALB_ECOLI


General information about the entry
View entry in simple text format
Entry nameTALB_ECOLI
Primary accession numberP0A870
Secondary accession number(s) P30148
integrated into SWISS-2DPAGE on August 1, 1995 (release 2)
2D Annotations were last modified onMay 15, 2003 (version 3)
General Annotations were last modified on May 19, 2011 (version 14)
Name and origin of the protein
DescriptionRecName: Full=Transaldolase B; EC=2.2.1.2;.
Gene nameName=talB
Synonyms=yaaK
OrderedLocusNames=b0008, JW0007
Annotated speciesEscherichia coli [TaxID: 562]
TaxonomyBacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
References
[1]   MAPPING ON GEL
MEDLINE=96314059; PubMed=8740179; [NCBI, ExPASy, EBI, Israel, Japan]
Pasquali C., Frutiger S., Wilkins M.R., Hughes G.J., Appel R.D., Bairoch A., Schaller D., Sanchez J.-C., Hochstrasser D.F.
''''''Two-dimensional gel electrophoresis of Escherichia coli homogenates: the Escherichia coli SWISS-2DPAGE database'';'';''
Electrophoresis 17(1):547-555(1996)
[2]   MAPPING ON GEL
Vanbogelen R.A., Abshire K.Z., Pertsemlidis A., Clark R.L., Neidhardt F.C.
''''''Gene-protein database of Escherichia coli K-12, edition 6'';'';''
(IN) Neidhardt et al. (eds.)Escherichia coli and Salmonella: Cellular and Molecular Biology (2nd ed.), pp.2067-2117, ASM Press, Washington DC (1996)
[3]   MAPPING ON GEL
PubMed=11680886; [NCBI, ExPASy, EBI, Israel, Japan]
Tonella L., Hoogland C., Binz P.-A., Appel R.D., Hochstrasser D.F., Sanchez J.-C.
''''''New perspectives in the Escherichia coli proteome investigation'';'';''
Proteomics 1(1):409-423(2001)
[4]   MAPPING ON GEL
PubMed=12469338; [NCBI, ExPASy, EBI, Israel, Japan]
Yan J.X., Devenish A.T., Wait R., Stone T., Lewis S., Fowler S.
''''''Fluorescence 2-D difference gel electrophoresis and mass spectrometry based proteomic analysis of E. coli'';'';''
Proteomics 2(1):1682-1698(2002)
2D PAGE maps for identified proteins
How to interpret a protein

ECOLI {Escherichia coli}
Escherichia coli
ECOLI
  map experimental info
  protein estimated location
 
ECOLI

MAP LOCATIONS:
pI=5.01; Mw=35885

MAPPING (identification):
AMINO ACID COMPOSITION AND MICROSEQUENCE ANALYSIS [1] AND IDENTIFIED ON 2-D GELS BY VANBOGELEN [2].



ECOLI4.5-5.5 {Escherichia coli(4.5-5.5)}
Escherichia coli
ECOLI4.5-5.5
  map experimental info
  protein estimated location
 
ECOLI4.5-5.5

MAP LOCATIONS:
pI=5.08; Mw=34775  [identification data]

MAPPING (identification):
Peptide mass fingerprinting [3].



ECOLI-DIGE4.5-6.5 {Escherichia coli DIGE (4.5-6.5)}
Escherichia coli
ECOLI-DIGE4.5-6.5
  map experimental info
  protein estimated location
 
ECOLI-DIGE4.5-6.5

MAP LOCATIONS:
pI=5.10; Mw=35000  [identification data]

MAPPING (identification):
Peptide mass fingerprinting [4].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from license@isb-sib.ch).
Cross-references
2DBase-EcoliP0A870; TALB_ECOLI.
UniProtKB/Swiss-ProtP0A870; TALB_ECOLI.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameTALB_ECOLI
Primary accession numberP0A870
Secondary accession number(s) P30148
Sequence was last modified on January 23, 2007 (version 2)
Annotations were last modified on October 19, 2011 (version 67)
Name and origin of the protein
DescriptionRecName: Full=Transaldolase B; EC=2.2.1.2;
Gene nameName=talB
Synonyms=yaaK
OrderedLocusNames=b0008, JW0007
Encoded onName=talB; Synonyms=yaaK; OrderedLocusNames=b0008, JW0007
Keywords3D-structure; Complete proteome; Cytoplasm; Direct protein sequencing; Pentose shunt; Reference proteome; Transferase.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLD13161; BAA21822.1; -; Genomic_DNA
EMBLS80045; AAB47022.1; -; Genomic_DNA
EMBLU00096; AAC73119.1; -; Genomic_DNA
EMBLAP009048; BAB96586.1; -; Genomic_DNA
PIRS40535; S40535; .
RefSeqNP_414549.1; NC_000913.2; .
PDB1I2N; X-ray; 2.05 A; A/B=2-317
PDB1I2O; X-ray; 2.05 A; A/B=2-317
PDB1I2P; X-ray; 2.05 A; A/B=2-317
PDB1I2Q; X-ray; 2.05 A; A/B=2-317
PDB1I2R; X-ray; 2.10 A; A/B=2-317
PDB1ONR; X-ray; 1.87 A; A/B=2-317
PDB1UCW; X-ray; 2.20 A; A/B=1-317
PDB3KOF; X-ray; 1.90 A; A/B=1-317
PDBsum1I2N; -; .
PDBsum1I2O; -; .
PDBsum1I2P; -; .
PDBsum1I2Q; -; .
PDBsum1I2R; -; .
PDBsum1ONR; -; .
PDBsum1UCW; -; .
PDBsum3KOF; -; .
ProteinModelPortalP0A870; -; .
SMRP0A870; 2-317; .
DIPDIP-31850N; -; .
IntActP0A870; 5; .
PhosSiteP0A870; -; .
SWISS-2DPAGEP0A870; -; .
2DBase-EcoliP0A870; -; .
EnsemblBacteriaEBESCT00000000114; EBESCP00000000114; EBESCG00000000089; .
EnsemblBacteriaEBESCT00000016994; EBESCP00000016285; EBESCG00000016053; .
GeneID944748; -; .
GenomeReviewsAP009048_GR; JW0007; .
GenomeReviewsU00096_GR; b0008; .
KEGGecj:JW0007; -; .
KEGGeco:b0008; -; .
EchoBASEEB1517; -; .
EcoGeneEG11556; talB; .
eggNOGCOG0176; -; .
GeneTreeEBGT00050000009451; -; .
HOGENOMHBG286747; -; .
OMADTGDFHA; -; .
ProtClustDBPRK05269; -; .
GenevestigatorP0A870; -; .
GOGO:0005829; C:cytosol; IDA:UniProtKB; .
GOGO:0016020; C:membrane; IDA:UniProtKB; .
GOGO:0004801; F:sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity; IEA:EC; .
GOGO:0006098; P:pentose-phosphate shunt; IEA:UniProtKB-KW; .
HAMAPMF_00492; Transaldolase_1; 1; -
InterProIPR013785; Aldolase_TIM; .
InterProIPR001585; Transaldolase; .
InterProIPR004730; Transaldolase_1; .
InterProIPR018225; Transaldolase_AS; .
Gene3DG3DSA:3.20.20.70; Aldolase_TIM; 1; .
PANTHERPTHR10683; Transaldolase; 1; .
PfamPF00923; Transaldolase; 1; .
TIGRFAMsTIGR00874; TalAB; 1; .
PROSITEPS01054; TRANSALDOLASE_1; 1; .
PROSITEPS00958; TRANSALDOLASE_2; 1; .



SWISS-2DPAGE image

SWISS-2DPAGE (search AC)


Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server