World-2DPAGE Home


SWISS-2DPAGE 
Search by  [accession number] 
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] *
[graphical interface]

     Select Remote Interfaces
[All Interfaces]
World-2DPAGE Portal
World-2DPAGE Repository

Exclude local DBs
has only effect if a remote
interface is selected
     

Protein list for SWISS-2DPAGE ARABIDOPSIS 
Arabidopsis thaliana  {Arabidopsis thaliana (Mouse-ear cress)}
tissue: Leaf


(map ID: 8d054429-bd8c-4c30-978b-07434b9af8cc)
Release: 19.2 -- 09 November 2011

Sample Preparation / Gel Related Documents


Protein list for arabidopsis   79 identified spots / 57 protein entries

Gene Name Description Accession n° Spot ID Exp pI Exp Mw Mapping Methods References
ACT8 RecName: Full=Actin-8; P99055
(ACT8_ARATH)
2D-001KBE
2D-001KBJ
5.13
5.34
43'852
43'943
{PMF}
{PMF}
1
1
APX1 RecName: Full=L-ascorbate peroxidase 1, cytosolic; Short=AP; Short=AtAPx01; EC=1.11.1.11; Q05431
(APX1_ARATH)
2D-001KLL
5.73
29'134
{PMF}
1
atpA RecName: Full=ATP synthase subunit alpha, chloroplastic; EC=3.6.3.14; AltName: Full=ATP synthase F1 sector subunit alpha; AltName: Full=F-ATPase subunit alpha; P56757
(ATPA_ARATH)
2D-001K5T
5.12
53'441
{PMF}
1
ATPA RecName: Full=ATP synthase subunit alpha, mitochondrial; P92549
(ATPAM_ARATH)
2D-001K6K
5.91
52'460
{PMF}
1
atpB RecName: Full=ATP synthase subunit beta, chloroplastic; EC=3.6.3.14; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta; P19366
(ATPB_ARATH)
2D-001K7F
2D-001K6F
2D-001K6G
5.29
5.29
5.35
50'968
52'676
52'568
{PMF}
{PMF}
{PMF}
1
1
1
BGLU18 RecName: Full=Beta-glucosidase 18; Short=AtBGLU18; EC=3.2.1.21; Flags: Precursor; Q9SE50
(BGL18_ARATH)
2D-001K32
6.60
58'901
{PMF}
1
CA1 RecName: Full=Carbonic anhydrase, chloroplastic; EC=4.2.1.1; AltName: Full=Carbonate dehydratase; Flags: Precursor; P27140
(CAHC_ARATH)
2D-001KM4
2D-001KLZ
5.43
5.71
28'620
28'620
{PMF}
{PMF}
1
1
CA2 RecName: Full=Carbonic anhydrase 2, chloroplastic; EC=4.2.1.1; AltName: Full=Carbonate dehydratase 2; P42737
(CAH2_ARATH)
2D-001KKH
2D-001KKJ
2D-001KKI
2D-001KL4
5.16
5.32
5.22
5.15
30'385
30'434
30'385
29'657
{Gm}
{Gm}
{Gm}
{Gm}
1, 2
1, 2
1, 2
1, 2
CHLI RecName: Full=Magnesium-chelatase subunit chlI, chloroplastic; EC=6.6.1.1; AltName: Full=Mg-protoporphyrin IX chelatase; AltName: Full=Protein CS/CH-42; Flags: Precursor; P16127
(CHLI_ARATH)
2D-001KCZ
6.33
41'395
{PMF}
1
CIMS RecName: Full=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; EC=2.1.1.14; AltName: Full=Cobalamin-independent methionine synthase isozyme; AltName: Full=Vitamin-B12-independent methionine synthase isozyme; O50008
(METE_ARATH)
2D-001K0N
6.15
76'088
{Gm}
1, 2
CPN21 RecName: Full=20 kDa chaperonin, chloroplastic; AltName: Full=Chaperonin 10; Short=Ch-CPN10; Short=Cpn10; AltName: Full=Chaperonin 20; AltName: Full=Protein Cpn21; Flags: Precursor; O65282
(CH10C_ARATH)
2D-001KMV
5.25
27'447
{PMF}
1
CPN60A1 RecName: Full=Chaperonin 60 subunit alpha 1, chloroplastic; Short=CPN-60 alpha 1; AltName: Full=RuBisCO large subunit-binding protein subunit alpha 1; AltName: Full=Protein SCHLEPPERLESS; Flags: Precursor; P21238
(CPNA1_ARATH)
2D-001K45
4.81
57'331
{PMF}
1
CRT1 RecName: Full=Calreticulin-1; Flags: Precursor; O04151
(CALR1_ARATH)
2D-001K5F
4.41
55'005
{Gm}
1, 2
CRT2 RecName: Full=Calreticulin-2; Flags: Precursor; Q38858
(CALR2_ARATH)
2D-001K6S
4.33
52'029
{Gm}
1, 2
CTIMC RecName: Full=Triosephosphate isomerase, cytosolic; Short=TIM; Short=Triose-phosphate isomerase; EC=5.3.1.1; P48491
(TPIS_ARATH)
2D-001KLM
2D-001KLQ
5.36
5.22
29'087
28'946
{Gm}
{Gm}
1, 2
1, 2
CYP20-3 RecName: Full=Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic; Short=PPIase CYP20-3; EC=5.2.1.8; AltName: Full=Cyclophilin of 20 kDa 3; AltName: Full=Cyclosporin A-binding protein; AltName: Full=Rotamase CYP20-3; AltName: Full=Rotamase cyclophilin-4; Flags: Precursor; P34791
(CP20C_ARATH)
2D-001KOT
2D-001KOU
5.43
5.26
21'513
21'689
{PMF}
{PMF}
1
1
ENO2 RecName: Full=Bifunctional enolase 2/transcriptional activator; EC=4.2.1.11; AltName: Full=2-phospho-D-glycerate hydro-lyase 2; AltName: Full=2-phosphoglycerate dehydratase 2; AltName: Full=LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1; P25696
(ENO2_ARATH)
2D-001K6U
5.45
52'029
{Gm}
1, 2
GAPA RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic; EC=1.2.1.13; AltName: Full=NADP-dependent glyceraldehydephosphate dehydrogenase subunit A; Flags: Precursor; P25856
(G3PA_ARATH)
2D-001KDP
5.17
40'135
{PMF}
1
GAPB RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic; EC=1.2.1.13; AltName: Full=NADP-dependent glyceraldehydephosphate dehydrogenase subunit B; Flags: Precursor; P25857
(G3PB_ARATH)
2D-001KC0
5.23
42'958
{PMF}
1
GDCST RecName: Full=Aminomethyltransferase, mitochondrial; EC=2.1.2.10; AltName: Full=Glycine cleavage system T protein; Short=GCVT; Flags: Precursor; O65396
(GCST_ARATH)
2D-001KCA
6.83
42'694
{PMF}
1
GLN2 RecName: Full=Glutamine synthetase, chloroplastic/mitochondrial; EC=6.3.1.2; AltName: Full=GS2; AltName: Full=Glutamate--ammonia ligase; Flags: Precursor; Q43127
(GLNA2_ARATH)
2D-001KBF
5.26
44'124
{PMF}
1
GSTF10 RecName: Full=Glutathione S-transferase F10; Short=AtGSTF10; EC=2.5.1.18; AltName: Full=AtGSTF4; AltName: Full=GST class-phi member 10; AltName: Full=Protein EARLY RESPONSE TO DEHYDRATION 13; P42761
(GSTFA_ARATH)
2D-001KML
5.49
27'934
{PMF}
1
GSTF2 RecName: Full=Glutathione S-transferase F2; Short=AtGSTF2; EC=2.5.1.18; AltName: Full=24 kDa auxin-binding protein; Short=AtPM24; AltName: Full=GST class-phi member 2; P46422
(GSTF2_ARATH)
2D-001KMG
2D-001KMI
6.09
5.86
28'115
28'024
{Gm}
{Gm}
1, 2
1, 2
GSTF6 RecName: Full=Glutathione S-transferase F6; Short=AtGSTF6; EC=2.5.1.18; AltName: Full=AtGSTF3; AltName: Full=GST class-phi member 6; AltName: Full=Glutathione S-transferase 1; Short=AtGST1; AltName: Full=Protein EARLY RESPONSE TO DEHYDRATION 11; P42760
(GSTF6_ARATH)
2D-001KMW
5.82
27'447
{PMF}
1
GSTF7 RecName: Full=Glutathione S-transferase F7; EC=2.5.1.18; AltName: Full=AtGSTF8; AltName: Full=GST class-phi member 7; AltName: Full=Glutathione S-transferase 11; Q9SRY5
(GSTF7_ARATH)
2D-001KMQ
6.30
27'754
{PMF}
1
HSC70-1 RecName: Full=Heat shock cognate 70 kDa protein 1; Short=Hsc70.1; P22953
(HSP71_ARATH)
2D-001K1E
4.97
65'407
{PMF,Gm}
1, 2
HSC70-3 RecName: Full=Heat shock cognate 70 kDa protein 3; Short=Hsc70.3; O65719
(HSP73_ARATH)
2D-001K1H
4.92
64'425
{PMF,Gm}
1, 2
LOX2 RecName: Full=Lipoxygenase 2, chloroplastic; Short=AtLOX2; EC=1.13.11.12; Flags: Precursor; P38418
(LOX2_ARATH)
2D-001JZ9
5.08
98'398
{PMF}
1
NDPK1 RecName: Full=Nucleoside diphosphate kinase 1; EC=2.7.4.6; AltName: Full=Nucleoside diphosphate kinase I; Short=NDK I; Short=NDP kinase I; Short=NDPK I; P39207
(NDK1_ARATH)
2D-001KQA
6.19
19'999
{Gm}
1, 2
OASB RecName: Full=Cysteine synthase, chloroplastic/chromoplastic; EC=2.5.1.47; AltName: Full=At.OAS.7-4; AltName: Full=CSase B; Short=AtCS-B; Short=CS-B; AltName: Full=O-acetylserine (thiol)-lyase; AltName: Full=O-acetylserine sulfhydrylase; AltName: Full=OAS-TL B; AltName: Full=cpACS1; Flags: Precursor; P47999
(CYSKP_ARATH)
2D-001KHD
6.00
34'532
{PMF}
1
PDH2 RecName: Full=Pyruvate dehydrogenase E1 component subunit beta, mitochondrial; Short=PDHE1-B; EC=1.2.4.1; Flags: Precursor; Q38799
(ODPB_ARATH)
2D-001KGE
5.25
35'689
{PMF}
1
PDIL1-1 RecName: Full=Protein disulfide isomerase-like 1-1; Short=AtPDIL1-1; EC=5.3.4.1; AltName: Full=Protein disulfide-isomerase 1; Short=PDI 1; AltName: Full=Protein disulfide-isomerase 5; Short=AtPDI5; Flags: Precursor; Q9XI01
(PDI11_ARATH)
2D-001K3R
4.71
58'163
{PMF}
1
PDIL2-1 RecName: Full=Protein disulfide-isomerase like 2-1; Short=AtPDIL2-1; EC=5.3.4.1; AltName: Full=P5; AltName: Full=Protein MATERNAL EFFECT EMBRYO ARREST 30; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 5; AltName: Full=Protein disulfide isomerase 11; Short=AtPDI11; AltName: Full=Protein disulfide-isomerase A6; AltName: Full=Protein disulfide-isomerase like 4-1; Short=AtPDIL4-1; Flags: Precursor; O22263
(PDI21_ARATH)
2D-001KEG
6.12
39'236
{PMF}
1
PSBO1 RecName: Full=Oxygen-evolving enhancer protein 1-1, chloroplastic; Short=OEE1; AltName: Full=33 kDa subunit of oxygen evolving system of photosystem II; AltName: Full=33 kDa thylakoid membrane protein; AltName: Full=Manganese-stabilizing protein 1; Short=MSP-1; AltName: Full=OEC 33 kDa subunit; Flags: Precursor; P23321
(PSBO1_ARATH)
2D-001KIU
2D-001KJO
4.92
5.00
32'154
31'181
{PMF}
{PMF}
1
1
PSBO2 RecName: Full=Oxygen-evolving enhancer protein 1-2, chloroplastic; Short=OEE1; AltName: Full=33 kDa subunit of oxygen evolving system of photosystem II; AltName: Full=33 kDa thylakoid membrane protein; AltName: Full=Manganese-stabilizing protein 2; Short=MSP-2; AltName: Full=OEC 33 kDa subunit; Flags: Precursor; Q9S841
(PSBO2_ARATH)
2D-001KIU
2D-001KJO
4.92
5.00
32'154
31'181
{PMF}
{PMF}
1
1
PSBP1 RecName: Full=Oxygen-evolving enhancer protein 2-1, chloroplastic; Short=OEE2; AltName: Full=23 kDa subunit of oxygen evolving system of photosystem II; AltName: Full=23 kDa thylakoid membrane protein; AltName: Full=OEC 23 kDa subunit; Short=OEC23; Flags: Precursor; Q42029
(PSBP1_ARATH)
2D-001KNM
5.24
25'036
{PMF}
1
PSBQ1 RecName: Full=Oxygen-evolving enhancer protein 3-1, chloroplastic; Short=OEE3; AltName: Full=16 kDa subunit of oxygen evolving system of photosystem II; AltName: Full=OEC 16 kDa subunit; Flags: Precursor; Q9XFT3
(PSBQ1_ARATH)
2D-001KPS
8.07
27'149
{PMF}
1
rbcL RecName: Full=Ribulose bisphosphate carboxylase large chain; Short=RuBisCO large subunit; EC=4.1.1.39; Flags: Precursor; O03042
(RBL_ARATH)
2D-001K6O
2D-001KHU
2D-001KKP
2D-001KLF
2D-001K7A
2D-001K9S
2D-001KBM
2D-001KL6
2D-001K74
2D-001KJ2
5.71
6.02
5.55
5.79
5.78
6.15
6.10
5.79
5.64
5.92
50'864
33'897
30'287
29'370
51'284
47'034
43'852
29'705
51'074
32'050
{Gm, PMF}
{PMF}
{PMF}
{PMF}
{PMF}
{PMF}
{PMF}
{PMF}
{PMF}
{PMF}
1, 2
2
2
2
2
2
2
2
2
2
RBCS-3B RecName: Full=Ribulose bisphosphate carboxylase small chain 3B, chloroplastic; Short=RuBisCO small subunit 3B; EC=4.1.1.39; Flags: Precursor; P99057
(RBS3B_ARATH)
2D-001KR5
2D-001KQE
2D-001UMS
2D-001UMR
5.79
5.79
6.08
6.07
15'551
17'718
14'843
17'069
{PMF}
{PMF}
{Gm, PMF}
{Gm, PMF}
2
2
1, 2
1, 2
RCA RecName: Full=Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic; Short=RA; Short=RuBisCO activase; Flags: Precursor; P10896
(RCA_ARATH)
2D-001K9K
5.01
47'034
{PMF}
1
SAM1 RecName: Full=S-adenosylmethionine synthase 1; Short=AdoMet synthase 1; EC=2.5.1.6; AltName: Full=Methionine adenosyltransferase 1; Short=MAT 1; P99056
(METK1_ARATH)
2D-001KAH
4.96
45'509
{PMF}
1
TGG1 RecName: Full=Myrosinase 1; EC=3.2.1.147; AltName: Full=Beta-glucosidase 38; Short=AtBGLU38; EC=3.2.1.21; AltName: Full=Sinigrinase 1; AltName: Full=Thioglucosidase 1; Flags: Precursor; P37702
(BGL38_ARATH)
2D-001K1T
2D-001K1O
5.21
5.26
63'412
62'957
{PMF}
{PMF}
1
1
TUFA RecName: Full=Elongation factor Tu, chloroplastic; Short=EF-Tu; AltName: Full=Ras-related protein RABE1b; Short=AtRABE1b; AltName: Full=Ras-related protein Rab8D; Short=AtRab8D; Flags: Precursor; P17745
(EFTU_ARATH)
2D-001KB5
5.44
44'398
{PMF}
1
VSP2 RecName: Full=Vegetative storage protein 2; Flags: Precursor; O82122
(VSP2_ARATH)
2D-001KKV
6.47
29'849
{PMF}
1
OrderedLocusNames=At1g04410 RecName: Full=Malate dehydrogenase, cytoplasmic 1; EC=1.1.1.37; P93819
(MDHC1_ARATH)
2D-001KEU
5.90
38'674
{Gm}
1, 2
OrderedLocusNames=At1g23740 RecName: Full=Quinone oxidoreductase-like protein At1g23740, chloroplastic; EC=1.-.-.-; Flags: Precursor; Q9ZUC1
(QORL_ARATH)
2D-001KG0
5.37
36'133
{PMF}
1
OrderedLocusNames=At1g32060 RecName: Full=Phosphoribulokinase, chloroplastic; Short=PRK; Short=PRKase; EC=2.7.1.19; AltName: Full=Phosphopentokinase; Flags: Precursor; P25697
(KPPR_ARATH)
2D-001KDQ
6.51
40'135
{PMF}
1
OrderedLocusNames=At1g53240 RecName: Full=Malate dehydrogenase 1, mitochondrial; EC=1.1.1.37; AltName: Full=mNAD-MDH 1; Flags: Precursor; Q9ZP06
(MDHM1_ARATH)
2D-001KHE
5.95
34'390
{PMF}
1
OrderedLocusNames=At1g59900 RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial; Short=PDHE1-A; EC=1.2.4.1; Flags: Precursor; P52901
(ODPA1_ARATH)
2D-001KDM
5.55
40'467
{PMF}
1
OrderedLocusNames=At2g37220 RecName: Full=Ribonucleoprotein At2g37220, chloroplastic; Flags: Precursor; Q9ZUU4
(ROC1_ARATH)
2D-001KLH
4.66
29'181
{PMF}
1
OrderedLocusNames=At2g37660 RecName: Full=Uncharacterized protein At2g37660, chloroplastic; Flags: Precursor; O80934
(Y2766_ARATH)
2D-001KKM
5.28
30'336
{PMF}
1
OrderedLocusNames=At2g39330 RecName: Full=Myrosinase-binding protein-like At2g39330; O80948
(MB23_ARATH)
2D-001K9W
6.23
46'937
{PMF}
1
OrderedLocusNames=At3g16470 RecName: Full=Myrosinase-binding protein-like At3g16470; O04309
(MB31_ARATH)
2D-001KAA
5.22
46'361
{PMF}
1
OrderedLocusNames=At3g55800 RecName: Full=Sedoheptulose-1,7-bisphosphatase, chloroplastic; EC=3.1.3.37; AltName: Full=SED(1,7)P2ase; AltName: Full=Sedoheptulose bisphosphatase; Short=SBPase; Flags: Precursor; P46283
(S17P_ARATH)
2D-001KE8
6.58
39'317
{PMF}
1
OrderedLocusNames=At4g08870 RecName: Full=Probable arginase; EC=3.5.3.1; Q9ZPF5
(ARGI2_ARATH)
2D-001KGO
5.30
35'469
{PMF}
1
OrderedLocusNames=At5g28540 RecName: Full=Luminal-binding protein 1; Short=AtBP1; Short=BiP1; Flags: Precursor; Q9LKR3
(BIP1_ARATH)
2D-001K18
5.05
67'757
{PMF}
1
OrderedLocusNames=At5g42020 RecName: Full=Luminal-binding protein 2; Short=AtBP2; Short=BiP2; Flags: Precursor; Q39043
(BIP2_ARATH)
2D-001K18
5.05
67'757
{PMF}
1
Mapping legends: { PMF } => 'Peptide mass fingerprinting', { Gm } => 'Gel matching'



Cited references

# PubMed/Medline Authors Location
[1] - Sarazin B., Tonella L., Marques K., Paesano S., Chane-Favre L., Sanchez J.-C., Hochstrasser D.F., Thiellement H.; Submitted (OCT-2000) to SWISS-2DPAGE.
[2] 10036779 Santoni V., Rouquie D., Doumas P., Mansion M., Boutry M., Degand H., Dupree P., Packman L., Sherrier J., Prime T., Bauw G., Posada E., Rouze P., Dehais P., Sahnoun I., Barlier I., Rossignol M.; Plant J. 16(1):633-641(1998).
''''''Use of a proteome strategy for tagging proteins present at the plasma membrane'';'';'';


Gel experimental information

Information Type Data
Map name ARABIDOPSIS {Arabidopsis thaliana}
Dimension 2-D
Related documents Sample Preparation / Gel Related Documents
Strain Comment [species] (L) Heynh. ecotype Columbia [Arabidopsis thaliana (Mouse-ear cress) / TaxID:3702]
Tissue (Swiss-Prot definition) Leaf
pI start: 3.50 - end: 10.00
Mw start: 10000 - end: 200000
Number of detected spots 1111
Number of identified spots 79
Number of identified proteins 57
Reference Bibliographic reference
Graphical interface
[Click for graphical interface]


SWISS-2DPAGE image

SWISS-2DPAGE (search Map)


Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server