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Protein list for SWISS-2DPAGE ECOLI5-6  Escherichia coli(5-6)  (map ID: a7d05e6c-c924-4a4f-a277-ad04359bd15e) Release: 19.2 -- 09 November 2011 Sample Preparation / Gel Related Documents Protein list for ecoli5-6   106 identified spots / 81 protein entries Gene Name Description Accession n° Spot ID Exp pI Exp Mw Mapping Methods References aceA RecName: Full=Isocitrate lyase; Short=ICL; Short=Isocitrase; Short=Isocitratase; EC=4.1.3.1; P0A9G6 (ACEA_ECOLI) 2D-001KZT 5.01 51'702 {PMF} 1 ackA RecName: Full=Acetate kinase; EC=2.7.2.1; AltName: Full=Acetokinase; P0A6A3 (ACKA_ECOLI) 2D-001LH3 5.72 31'846 {PMF} 1 adk RecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; P69441 (KAD_ECOLI) 2D-001LHC 5.48 31'661 {PMF} 1 ahpF RecName: Full=Alkyl hydroperoxide reductase subunit F; EC=1.8.1.-; AltName: Full=Alkyl hydroperoxide reductase F52A protein; P35340 (AHPF_ECOLI) 2D-001LA1 5.20 41'503 {PMF} 1 aldA RecName: Full=Lactaldehyde dehydrogenase; EC=1.2.1.22; AltName: Full=Aldehyde dehydrogenase A; AltName: Full=Glycolaldehyde dehydrogenase; EC=1.2.1.21; P25553 (ALDA_ECOLI) 2D-001L6J 5.43 50'034 {PMF} 1 argD RecName: Full=Acetylornithine/succinyldiaminopimelate aminotransferase; Short=ACOAT; Short=DapATase; Short=Succinyldiaminopimelate transferase; EC=2.6.1.11; EC=2.6.1.17; P18335 (ARGD_ECOLI) 2D-001LFI 5.19 33'559 {PMF} 1 argF RecName: Full=Ornithine carbamoyltransferase chain F; EC=2.1.3.3; AltName: Full=OTCase-2; P06960 (OTC2_ECOLI) 2D-001LIF 5.73 30'486 {PMF} 1 argG RecName: Full=Argininosuccinate synthase; EC=6.3.4.5; AltName: Full=Citrulline--aspartate ligase; P0A6E4 (ASSY_ECOLI) 2D-001KZX 5.08 51'667 {PMF} 1 aroA RecName: Full=3-phosphoshikimate 1-carboxyvinyltransferase; EC=2.5.1.19; AltName: Full=5-enolpyruvylshikimate-3-phosphate synthase; Short=EPSP synthase; Short=EPSPS; P0A6D3 (AROA_ECOLI) 2D-001L27 2D-001KYP 5.23 5.34 50'990 53'476 {PMF} {PMF} 1 1 aroK RecName: Full=Shikimate kinase 1; Short=SK 1; EC=2.7.1.71; AltName: Full=Shikimate kinase I; Short=SKI; P0A6D7 (AROK_ECOLI) 2D-001LOE 5.18 21'250 {PMF} 1 artI RecName: Full=Putative ABC transporter arginine-binding protein 2; Flags: Precursor; P30859 (ARTI_ECOLI) 2D-001LHF 5.07 31'478 {PMF} 1 asd RecName: Full=Aspartate-semialdehyde dehydrogenase; Short=ASA dehydrogenase; Short=ASADH; EC=1.2.1.11; AltName: Full=Aspartate-beta-semialdehyde dehydrogenase; P0A9Q9 (DHAS_ECOLI) 2D-001L5A 5.20 50'339 {PMF} 1 aspC RecName: Full=Aspartate aminotransferase; Short=AspAT; EC=2.6.1.1; AltName: Full=Transaminase A; P00509 (AAT_ECOLI) 2D-001L4V 2D-001L6U 5.53 5.56 50'441 49'421 {PMF} {PMF} 1 1 atpA RecName: Full=ATP synthase subunit alpha; EC=3.6.3.14; AltName: Full=ATP synthase F1 sector subunit alpha; AltName: Full=F-ATPase subunit alpha; P0ABB0 (ATPA_ECOLI) 2D-001LDG 5.81 36'727 {PMF} 1 atpC RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP synthase F1 sector epsilon subunit; AltName: Full=F-ATPase epsilon subunit; P0A6E6 (ATPE_ECOLI) 2D-001LTD 5.45 13'773 {PMF} 1 clpB RecName: Full=Chaperone protein ClpB; AltName: Full=Heat shock protein F84.1; P63284 (CLPB_ECOLI) 2D-001LEJ 5.44 34'853 {PMF} 1 clpP RecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Caseinolytic protease; AltName: Full=Endopeptidase Clp; AltName: Full=Heat shock protein F21.5; AltName: Full=Protease Ti; Flags: Precursor; P0A6G7 (CLPP_ECOLI) 2D-001LMN 5.60 24'224 {PMF} 1 cmoA RecName: Full=tRNA (cmo5U34)-methyltransferase; EC=2.1.1.-; P76290 (CMOA_ECOLI) 2D-001LHP 5.80 31'295 {PMF} 1 cysK RecName: Full=Cysteine synthase A; Short=CSase A; EC=2.5.1.47; AltName: Full=O-acetylserine (thiol)-lyase A; Short=OAS-TL A; AltName: Full=O-acetylserine sulfhydrylase A; AltName: Full=Sulfate starvation-induced protein 5; Short=SSI5; P0ABK5 (CYSK_ECOLI) 2D-001L9U 2D-001L9C 5.10 5.78 41'867 42'978 {PMF} {PMF} 1 1 dapB RecName: Full=Dihydrodipicolinate reductase; Short=DHPR; EC=1.3.1.26; P04036 (DAPB_ECOLI) 2D-001LHT 2D-001LCD 5.33 5.11 31'023 37'922 {PMF} {PMF} 1 1 deoC RecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase; P0A6L0 (DEOC_ECOLI) 2D-001LFC 5.52 33'657 {PMF} 1 dppA RecName: Full=Periplasmic dipeptide transport protein; AltName: Full=Dipeptide-binding protein; Short=DBP; Flags: Precursor; P23847 (DPPA_ECOLI) 2D-001L65 2D-001KZ7 5.71 5.71 50'118 52'000 {PMF} {PMF} 1 1 dps RecName: Full=DNA protection during starvation protein; EC=1.16.-.-; P0ABT2 (DPS_ECOLI) 2D-001LR4 2D-001LRH 2D-001LQC 5.27 5.21 5.78 16'787 16'164 17'897 {PMF} {PMF} {PMF} 1 1 1 eda RecName: Full=KHG/KDPG aldolase; Includes: RecName: Full=4-hydroxy-2-oxoglutarate aldolase; EC=4.1.3.16; AltName: Full=2-keto-4-hydroxyglutarate aldolase; Short=KHG-aldolase; Includes: RecName: Full=2-dehydro-3-deoxy-phosphogluconate aldolase; EC=4.1.2.14; AltName: Full=2-keto-3-deoxy-6-phosphogluconate aldolase; Short=KDPG-aldolase; AltName: Full=Phospho-2-dehydro-3-deoxygluconate aldolase; AltName: Full=Phospho-2-keto-3-deoxygluconate aldolase; P0A955 (ALKH_ECOLI) 2D-001LKD 5.43 27'937 {PMF} 1 eno RecName: Full=Enolase; EC=4.2.1.11; AltName: Full=2-phospho-D-glycerate hydro-lyase; AltName: Full=2-phosphoglycerate dehydratase; P0A6P9 (ENO_ECOLI) 2D-001L0V 2D-001L06 2D-001L39 2D-001L0Q 2D-001L6G 2D-001L3T 5.16 5.29 5.00 5.27 5.26 5.02 51'319 51'580 50'698 51'301 50'000 50'647 {PMF} {PMF} {PMF} {PMF} {PMF} {PMF} 1 1 1 1 1 1 fabI RecName: Full=Enoyl-[acyl-carrier-protein] reductase [NADH] FabI; Short=ENR; EC=1.3.1.9; AltName: Full=NADH-dependent enoyl-ACP reductase; P0AEK4 (FABI_ECOLI) 2D-001LBQ 2D-001LCK 5.37 5.33 38'366 37'266 {PMF} {PMF} 1 1 fbaA RecName: Full=Fructose-bisphosphate aldolase class 2; Short=FBP aldolase; Short=FBPA; EC=4.1.2.13; AltName: Full=Fructose-1,6-bisphosphate aldolase; AltName: Full=Fructose-bisphosphate aldolase class II; P0AB71 (ALF_ECOLI) 2D-001L6U 2D-001L5L 5.56 5.56 49'421 50'220 {PMF} {PMF} 1 1 fur RecName: Full=Ferric uptake regulation protein; Short=Ferric uptake regulator; P0A9A9 (FUR_ECOLI) 2D-001LQT 2D-001LQC 5.78 5.78 17'233 17'897 {PMF} {PMF} 1 1 fusA RecName: Full=Elongation factor G; Short=EF-G; P0A6M8 (EFG_ECOLI) 2D-001L4G 5.23 50'424 {PMF} 1 gapA RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase A; Short=GAPDH-A; EC=1.2.1.12; P0A9B2 (G3P1_ECOLI) 2D-001LAE 5.74 40'430 {PMF} 1 glnK RecName: Full=Nitrogen regulatory protein P-II 2; P0AC55 (GLNK_ECOLI) 2D-001LUG 5.78 12'732 {PMF} 1 gltD RecName: Full=Glutamate synthase [NADPH] small chain; EC=1.4.1.13; AltName: Full=Glutamate synthase subunit beta; Short=GLTS beta chain; AltName: Full=NADPH-GOGAT; P09832 (GLTD_ECOLI) 2D-001KYZ 5.48 53'050 {PMF} 1 gpmA RecName: Full=2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Short=BPG-dependent PGAM; Short=PGAM; Short=Phosphoglyceromutase; Short=dPGM; EC=5.4.2.1; P62707 (GPMA_ECOLI) 2D-001LGQ 5.82 32'032 {PMF} 1 gpt RecName: Full=Xanthine phosphoribosyltransferase; EC=2.4.2.22; AltName: Full=Xanthine-guanine phosphoribosyltransferase; Short=XGPRT; P0A9M5 (XGPT_ECOLI) 2D-001LRH 5.21 16'164 {PMF} 1 gst RecName: Full=Glutathione S-transferase; EC=2.5.1.18; P0A9D2 (GST_ECOLI) 2D-001LKS 5.76 27'614 {PMF} 1 guaB RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP dehydrogenase; Short=IMPD; Short=IMPDH; EC=1.1.1.205; P0ADG7 (IMDH_ECOLI) 2D-001LC6 5.49 38'144 {PMF} 1 hisH RecName: Full=Imidazole glycerol phosphate synthase subunit HisH; EC=2.4.2.-; AltName: Full=IGP synthase glutamine amidotransferase subunit; AltName: Full=IGP synthase subunit HisH; AltName: Full=ImGP synthase subunit HisH; Short=IGPS subunit HisH; P60595 (HIS5_ECOLI) 2D-001LL3 5.24 27'057 {PMF} 1 ibpA RecName: Full=Small heat shock protein ibpA; AltName: Full=16 kDa heat shock protein A; P0C054 (IBPA_ECOLI) 2D-001LS6 5.63 15'384 {PMF} 1 icd RecName: Full=Isocitrate dehydrogenase [NADP]; Short=IDH; EC=1.1.1.42; AltName: Full=IDP; AltName: Full=NADP(+)-specific ICDH; AltName: Full=Oxalosuccinate decarboxylase; P08200 (IDH_ECOLI) 2D-001KVT 5.00 74'518 {PMF} 1 ivy RecName: Full=Inhibitor of vertebrate lysozyme; Flags: Precursor; P0AD59 (IVY_ECOLI) 2D-001LUK 2D-001LSW 5.33 5.41 12'548 14'304 {PMF} {PMF} 1 1 livJ RecName: Full=Leu/Ile/Val-binding protein; Short=LIV-BP; Flags: Precursor; P0AD96 (LIVJ_ECOLI) 2D-001L3W 2D-001L4G 2D-001LHX 2D-001LNA 5.09 5.23 5.67 5.33 50'544 50'424 30'753 23'392 {PMF} {PMF} {PMF} {PMF} 1 1 1 1 livK RecName: Full=Leucine-specific-binding protein; Short=L-BP; Short=LS-BP; Flags: Precursor; P04816 (LIVK_ECOLI) 2D-001KXJ 5.25 59'333 {PMF} 1 lolA RecName: Full=Outer-membrane lipoprotein carrier protein; AltName: Full=P20; Flags: Precursor; P61316 (LOLA_ECOLI) 2D-001LOG 5.52 21'066 {PMF} 1 malE RecName: Full=Maltose-binding periplasmic protein; AltName: Full=MBP; AltName: Full=MMBP; AltName: Full=Maltodextrin-binding protein; Flags: Precursor; P0AEX9 (MALE_ECOLI) 2D-001L3W 2D-001L61 5.09 5.00 50'544 50'085 {PMF} {PMF} 1 1 manA RecName: Full=Mannose-6-phosphate isomerase; EC=5.3.1.8; AltName: Full=Phosphohexomutase; AltName: Full=Phosphomannose isomerase; Short=PMI; P00946 (MANA_ECOLI) 2D-001L3N 5.16 50'629 {PMF} 1 map RecName: Full=Methionine aminopeptidase; Short=MAP; EC=3.4.11.18; AltName: Full=Peptidase M; P0AE18 (AMPM_ECOLI) 2D-001LBR 5.71 38'478 {PMF} 1 mdh RecName: Full=Malate dehydrogenase; EC=1.1.1.37; P61889 (MDH_ECOLI) 2D-001LA5 2D-001LD3 2D-001LC6 5.57 5.25 5.49 40'903 37'049 38'144 {PMF} {PMF} {PMF} 1 1 1 moaB RecName: Full=Molybdenum cofactor biosynthesis protein B; P0AEZ9 (MOAB_ECOLI) 2D-001LPP 5.74 18'915 {PMF} 1 nadE RecName: Full=NH(3)-dependent NAD(+) synthetase; EC=6.3.1.5; AltName: Full=Nicotinamide adenine dinucleotide synthetase; Short=NADS; AltName: Full=Nitrogen regulatory protein; P18843 (NADE_ECOLI) 2D-001L85 2D-001L9E 5.43 5.34 45'820 42'978 {PMF} {PMF} 1 1 ndk RecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; P0A763 (NDK_ECOLI) 2D-001LSV 2D-001LSX 5.19 5.53 14'514 14'556 {PMF} {PMF} 1 1 nfnB RecName: Full=Oxygen-insensitive NAD(P)H nitroreductase; EC=1.-.-.-; AltName: Full=Dihydropteridine reductase; EC=1.5.1.34; AltName: Full=FMN-dependent nitroreductase; P38489 (NFNB_ECOLI) 2D-001LGL 2D-001LKH 5.47 5.32 32'502 28'018 {PMF} {PMF} 1 1 nuoB RecName: Full=NADH-quinone oxidoreductase subunit B; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit B; AltName: Full=NUO2; P0AFC7 (NUOB_ECOLI) 2D-001LI0 5.42 30'843 {PMF} 1 nusG RecName: Full=Transcription antitermination protein nusG; P0AFG0 (NUSG_ECOLI) 2D-001LSR 5.44 14'684 {PMF} 1 ompA RecName: Full=Outer membrane protein A; AltName: Full=Outer membrane protein II*; Flags: Precursor; P0A910 (OMPA_ECOLI) 2D-001LU0 2D-001LT4 5.25 5.23 13'108 14'346 {PMF} {PMF} 1 1 oppA RecName: Full=Periplasmic oligopeptide-binding protein; Flags: Precursor; P23843 (OPPA_ECOLI) 2D-001L2T 2D-001L2S 2D-001L2C 5.63 5.47 5.13 50'921 50'921 50'973 {PMF} {PMF} {PMF} 1 1 1 panC RecName: Full=Pantothenate synthetase; Short=PS; EC=6.3.2.1; AltName: Full=Pantoate--beta-alanine ligase; AltName: Full=Pantoate-activating enzyme; P31663 (PANC_ECOLI) 2D-001LEF 5.25 35'056 {PMF} 1 pfkA RecName: Full=6-phosphofructokinase isozyme 1; EC=2.7.1.11; AltName: Full=6-phosphofructokinase isozyme I; AltName: Full=Phosphofructokinase 1; AltName: Full=Phosphohexokinase 1; P0A796 (K6PF1_ECOLI) 2D-001L85 5.43 45'820 {PMF} 1 pheS RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; EC=6.1.1.20; AltName: Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS; P08312 (SYFA_ECOLI) 2D-001LAE 2D-001L8E 5.74 5.81 40'430 45'820 {PMF} {PMF} 1 1 ppiB RecName: Full=Peptidyl-prolyl cis-trans isomerase B; Short=PPIase B; EC=5.2.1.8; AltName: Full=Rotamase B; P23869 (PPIB_ECOLI) 2D-001LP8 5.51 19'192 {PMF} 1 proA RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR; EC=1.2.1.41; AltName: Full=Glutamate-5-semialdehyde dehydrogenase; AltName: Full=Glutamyl-gamma-semialdehyde dehydrogenase; Short=GSA dehydrogenase; P07004 (PROA_ECOLI) 2D-001L13 5.39 51'249 {PMF} 1 purK RecName: Full=N5-carboxyaminoimidazole ribonucleotide synthase; Short=N5-CAIR synthase; EC=6.3.4.18; AltName: Full=5-(carboxyamino)imidazole ribonucleotide synthetase; P09029 (PURK_ECOLI) 2D-001LKF 5.75 28'100 {PMF} 1 ribE RecName: Full=Riboflavin synthase alpha chain; EC=2.5.1.9; P0AFU8 (RISA_ECOLI) 2D-001LL5 5.67 26'821 {PMF} 1 rtcB RecName: Full=RNA-splicing ligase RtcB; EC=6.5.1.-; P46850 (RTCB_ECOLI) 2D-001LF6 5.65 34'051 {PMF} 1 sad RecName: Full=Succinate semialdehyde dehydrogenase [NAD(P)+] Sad; Short=SSADH; Short=SSDH; EC=1.2.1.16; P76149 (SAD_ECOLI) 2D-001KYY 5.38 52'838 {PMF} 1 serC RecName: Full=Phosphoserine aminotransferase; EC=2.6.1.52; AltName: Full=Phosphohydroxythreonine aminotransferase; Short=PSAT; P23721 (SERC_ECOLI) 2D-001L3T 2D-001L6G 5.02 5.26 50'647 50'000 {PMF} {PMF} 1 1 sodB RecName: Full=Superoxide dismutase [Fe]; EC=1.15.1.1; P0AGD3 (SODF_ECOLI) 2D-001LOD 2D-001LM6 5.45 5.49 21'312 25'158 {PMF} {PMF} 1 1 ssb RecName: Full=Single-stranded DNA-binding protein; Short=SSB; AltName: Full=Helix-destabilizing protein; P0AGE0 (SSB_ECOLI) 2D-001LPG 2D-001LMY 5.46 5.41 19'137 23'874 {PMF} {PMF} 1 1 sucD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; EC=6.2.1.5; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; P0AGE9 (SUCD_ECOLI) 2D-001LJ2 5.73 29'525 {PMF} 1 suhB RecName: Full=Inositol-1-monophosphatase; Short=I-1-Pase; Short=IMPase; Short=Inositol-1-phosphatase; EC=3.1.3.25; P0ADG4 (SUHB_ECOLI) 2D-001LDV 5.71 35'882 {PMF} 1 thrB RecName: Full=Homoserine kinase; Short=HK; Short=HSK; EC=2.7.1.39; P00547 (KHSE_ECOLI) 2D-001LCK 5.33 37'266 {PMF} 1 trpA RecName: Full=Tryptophan synthase alpha chain; EC=4.2.1.20; P0A877 (TRPA_ECOLI) 2D-001LGC 5.18 32'691 {PMF} 1 trpB RecName: Full=Tryptophan synthase beta chain; EC=4.2.1.20; P0A879 (TRPB_ECOLI) 2D-001LFK 5.03 33'559 {PMF} 1 tufB RecName: Full=Elongation factor Tu 2; Short=EF-Tu 2; AltName: Full=P-43; P0CE48 (EFTU2_ECOLI) 2D-001L6H 2D-001L7G 2D-001L2D 2D-001L2E 2D-001L1Y 2D-001L7Q 2D-001L13 5.34 5.31 5.32 5.35 5.20 5.33 5.39 50'034 48'144 50'990 50'921 51'059 47'448 51'249 {PMF} {PMF} {PMF} {PMF} {PMF} {PMF} {PMF} 1 1 1 1 1 1 1 udp RecName: Full=Uridine phosphorylase; Short=UPase; Short=UrdPase; EC=2.4.2.3; P12758 (UDP_ECOLI) 2D-001LH9 5.66 31'754 {PMF} 1 wrbA RecName: Full=Flavoprotein wrbA; AltName: Full=Trp repressor-binding protein; P0A8G6 (WRBA_ECOLI) 2D-001LKA 5.51 28'018 {PMF} 1 xthA RecName: Full=Exodeoxyribonuclease III; Short=EXO III; Short=Exonuclease III; EC=3.1.11.2; AltName: Full=AP endonuclease VI; P09030 (EX3_ECOLI) 2D-001LD0 5.80 37'049 {PMF} 1 yaeT RecName: Full=Outer membrane protein assembly factor yaeT; AltName: Full=Omp85; Flags: Precursor; P0A940 (YAET_ECOLI) 2D-001L7Q 5.33 47'448 {PMF} 1 yggX RecName: Full=Probable Fe(2+)-trafficking protein; P0A8P3 (FETP_ECOLI) 2D-001LUV 5.46 12'295 {PMF} 1 ygiN RecName: Full=Probable quinol monooxygenase ygiN; Short=QuMo; EC=1.-.-.-; P0ADU2 (YGIN_ECOLI) 2D-001LW8 5.77 11'202 {PMF} 1 yhdH RecName: Full=Putative quinone oxidoreductase YhdH; EC=1.6.5.-; P26646 (YHDH_ECOLI) 2D-001LAM 5.60 40'548 {PMF} 1 znuA RecName: Full=High-affinity zinc uptake system protein znuA; Flags: Precursor; P39172 (ZNUA_ECOLI) 2D-001LC7 5.51 37'702 {PMF} 1 Mapping legends: { PMF } => 'Peptide mass fingerprinting' Cited references # PubMed/Medline Authors Location [1] 11680886 Tonella L., Hoogland C., Binz P.-A., Appel R.D., Hochstrasser D.F., Sanchez J.-C.; Proteomics 1(1):409-423(2001). ''''''New perspectives in the Escherichia coli proteome investigation'';'';''; Gel experimental information Information Type Data Map name ECOLI5-6 {Escherichia coli(5-6)} Dimension 2-D Related documents Sample Preparation / Gel Related Documents Strain Comment [species] W3110 [Escherichia coli / TaxID:562] pI start: 5.00 - end: 6.00 Mw start: 10000 - end: 200000 Number of detected spots 1536 Number of identified spots 106 Number of identified proteins 81 Reference Bibliographic reference Graphical interface SWISS-2DPAGE (search Map)