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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: P0AG48




SWISS-2DPAGE:  P0AG48


P0AG48


General information about the entry
View entry in simple text format
Entry nameRL21_ECOLI
Primary accession numberP0AG48
Secondary accession number(s) P02422
integrated into SWISS-2DPAGE on August 1, 1995 (release 2)
2D Annotations were last modified onMarch 31, 2004 (version 1)
General Annotations were last modified on May 19, 2011 (version 12)
Name and origin of the protein
DescriptionRecName: Full=50S ribosomal protein L21;.
Gene nameName=rplU
OrderedLocusNames=b3186, JW3153
Annotated speciesEscherichia coli [TaxID: 562]
TaxonomyBacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
References
[1]   MAPPING ON GEL
MEDLINE=96314059; PubMed=8740179; [NCBI, ExPASy, EBI, Israel, Japan]
Pasquali C., Frutiger S., Wilkins M.R., Hughes G.J., Appel R.D., Bairoch A., Schaller D., Sanchez J.-C., Hochstrasser D.F.
''''''Two-dimensional gel electrophoresis of Escherichia coli homogenates: the Escherichia coli SWISS-2DPAGE database'';'';''
Electrophoresis 17(1):547-555(1996)
[2]   MAPPING ON GEL
Vanbogelen R.A., Abshire K.Z., Pertsemlidis A., Clark R.L., Neidhardt F.C.
''''''Gene-protein database of Escherichia coli K-12, edition 6'';'';''
(IN) Neidhardt et al. (eds.)Escherichia coli and Salmonella: Cellular and Molecular Biology (2nd ed.), pp.2067-2117, ASM Press, Washington DC (1996)
[3]   MAPPING ON GEL
MEDLINE=80159887; PubMed=6988414; [NCBI, ExPASy, EBI, Israel, Japan]
Bloch P.L., Phillips T.A., Neidhardt F.C.
''''''Protein identifications of O'Farrell two-dimensional gels: locations of 81 Escherichia coli proteins'';'';''
J. Bacteriol. 141(1):1409-1420(1980)
2D PAGE maps for identified proteins
How to interpret a protein

ECOLI {Escherichia coli}
Escherichia coli
ECOLI
  map experimental info
  protein estimated location
 
ECOLI

MAP LOCATIONS:
pI=6.71; Mw=11023

MAPPING (identification):
MICROSEQUENCE ANALYSIS [1] AND IDENTIFIED ON 2-D GELS BY VANBOGELEN [2] AND BLOCH [3].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from license@isb-sib.ch).
Cross-references
ECO2DBASEI013.2; 6TH EDITION.
UniProtKB/Swiss-ProtP0AG48; RL21_ECOLI.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameRL21_ECOLI
Primary accession numberP0AG48
Secondary accession number(s) P02422 Q2M926
Sequence was last modified on July 21, 1986 (version 1)
Annotations were last modified on October 19, 2011 (version 59)
Name and origin of the protein
DescriptionRecName: Full=50S ribosomal protein L21;
Gene nameName=rplU
OrderedLocusNames=b3186, JW3153
Encoded onName=rplU; OrderedLocusNames=b3186, JW3153
Keywords3D-structure; Complete proteome; Direct protein sequencing; Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLD13267; BAA02525.1; -; Genomic_DNA
EMBLU18997; AAA57987.1; -; Genomic_DNA
EMBLU00096; AAC76218.1; -; Genomic_DNA
EMBLAP009048; BAE77230.1; -; Genomic_DNA
PIRJS0766; R5EC21; .
RefSeqNP_417653.1; NC_000913.2; .
PDB1VS6; X-ray; 3.46 A; R=1-103
PDB1VS8; X-ray; 3.46 A; R=1-103
PDB1VT2; X-ray; 3.30 A; R=1-103
PDB2AW4; X-ray; 3.46 A; R=1-103
PDB2AWB; X-ray; 3.46 A; R=1-103
PDB2I2T; X-ray; 3.22 A; R=1-103
PDB2I2V; X-ray; 3.22 A; R=1-103
PDB2J28; EM; 8.00 A; R=1-103
PDB2QAM; X-ray; 3.21 A; R=1-103
PDB2QAO; X-ray; 3.21 A; R=1-103
PDB2QBA; X-ray; 3.54 A; R=1-103
PDB2QBC; X-ray; 3.54 A; R=1-103
PDB2QBE; X-ray; 3.30 A; R=1-103
PDB2QBG; X-ray; 3.30 A; R=1-103
PDB2QBI; X-ray; 4.00 A; R=1-103
PDB2QBK; X-ray; 4.00 A; R=1-103
PDB2QOV; X-ray; 3.93 A; R=1-103
PDB2QOX; X-ray; 3.93 A; R=1-103
PDB2QOZ; X-ray; 3.50 A; R=1-103
PDB2QP1; X-ray; 3.50 A; R=1-103
PDB2RDO; EM; 9.10 A; R=1-103
PDB2WWQ; EM; 5.80 A; R=1-103
PDB2Z4L; X-ray; 4.45 A; R=1-103
PDB2Z4N; X-ray; 4.45 A; R=1-103
PDB3BBX; EM; 10.00 A; R=1-103
PDB3E1B; EM; -; K=1-103
PDB3E1D; EM; -; K=1-103
PDB3FIK; EM; 6.70 A; R=1-103
PDB3I1N; X-ray; 3.19 A; R=1-103
PDB3I1P; X-ray; 3.19 A; R=1-103
PDB3I1R; X-ray; 3.81 A; R=1-103
PDB3I1T; X-ray; 3.81 A; R=1-103
PDB3I20; X-ray; 3.71 A; R=1-103
PDB3I22; X-ray; 3.71 A; R=1-103
PDB3IZT; EM; -; S=1-103
PDB3IZU; EM; -; S=1-103
PDB3J01; EM; -; R=1-103
PDB3KCR; EM; -; R=1-103
PDB3OAS; X-ray; 3.25 A; R=1-103
PDB3OAT; X-ray; 3.25 A; R=1-103
PDB3OFC; X-ray; 3.19 A; R=1-103
PDB3OFD; X-ray; 3.19 A; R=1-103
PDB3OFQ; X-ray; 3.10 A; R=1-103
PDB3OFR; X-ray; 3.10 A; R=1-103
PDB3OFZ; X-ray; 3.29 A; R=1-103
PDB3OG0; X-ray; 3.29 A; R=1-103
PDB3ORB; X-ray; 3.30 A; R=1-103
PDB3R8S; X-ray; 3.00 A; R=1-103
PDB3R8T; X-ray; 3.00 A; R=1-103
PDBsum1VS6; -; .
PDBsum1VS8; -; .
PDBsum1VT2; -; .
PDBsum2AW4; -; .
PDBsum2AWB; -; .
PDBsum2I2T; -; .
PDBsum2I2V; -; .
PDBsum2J28; -; .
PDBsum2QAM; -; .
PDBsum2QAO; -; .
PDBsum2QBA; -; .
PDBsum2QBC; -; .
PDBsum2QBE; -; .
PDBsum2QBG; -; .
PDBsum2QBI; -; .
PDBsum2QBK; -; .
PDBsum2QOV; -; .
PDBsum2QOX; -; .
PDBsum2QOZ; -; .
PDBsum2QP1; -; .
PDBsum2RDO; -; .
PDBsum2WWQ; -; .
PDBsum2Z4L; -; .
PDBsum2Z4N; -; .
PDBsum3BBX; -; .
PDBsum3E1B; -; .
PDBsum3E1D; -; .
PDBsum3FIK; -; .
PDBsum3I1N; -; .
PDBsum3I1P; -; .
PDBsum3I1R; -; .
PDBsum3I1T; -; .
PDBsum3I20; -; .
PDBsum3I22; -; .
PDBsum3IZT; -; .
PDBsum3IZU; -; .
PDBsum3J01; -; .
PDBsum3KCR; -; .
PDBsum3OAS; -; .
PDBsum3OAT; -; .
PDBsum3OFC; -; .
PDBsum3OFD; -; .
PDBsum3OFQ; -; .
PDBsum3OFR; -; .
PDBsum3OFZ; -; .
PDBsum3OG0; -; .
PDBsum3ORB; -; .
PDBsum3R8S; -; .
PDBsum3R8T; -; .
ProteinModelPortalP0AG48; -; .
SMRP0AG48; 1-103; .
DIPDIP-47852N; -; .
IntActP0AG48; 80; .
MINTMINT-1280768; -; .
SWISS-2DPAGEP0AG48; -; .
ECO2DBASEI013.2; 6TH EDITION; .
EnsemblBacteriaEBESCT00000003884; EBESCP00000003884; EBESCG00000003176; .
EnsemblBacteriaEBESCT00000017503; EBESCP00000016794; EBESCG00000016559; .
GeneID949057; -; .
GenomeReviewsAP009048_GR; JW3153; .
GenomeReviewsU00096_GR; b3186; .
KEGGecj:JW3153; -; .
KEGGeco:b3186; -; .
EchoBASEEB4295; -; .
EcoGeneEG50001; rplU; .
eggNOGCOG0261; -; .
GeneTreeEBGT00050000010507; -; .
HOGENOMHBG706775; -; .
OMAIKVEQIA; -; .
ProtClustDBPRK05573; -; .
BioCycEcoCyc:EG50001-MONOMER; -; .
GenevestigatorP0AG48; -; .
GOGO:0005840; C:ribosome; IEA:UniProtKB-KW; .
GOGO:0019843; F:rRNA binding; IEA:UniProtKB-KW; .
GOGO:0003735; F:structural constituent of ribosome; IEA:InterPro; .
GOGO:0006412; P:translation; IEA:InterPro; .
HAMAPMF_01363; Ribosomal_L21; 1; -
InterProIPR001787; Ribosomal_L21; .
InterProIPR018258; Ribosomal_L21_CS; .
PANTHERPTHR21349; Ribosomal_L21p; 1; .
PfamPF00829; Ribosomal_L21p; 1; .
TIGRFAMsTIGR00061; L21; 1; .
PROSITEPS01169; RIBOSOMAL_L21; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server