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Searching in 'World-2DPAGE Repository [0003]' for entry matching: P48491 World-2DPAGE Repository (0003):  P48491 P48491 General information about the entry View entry in simple text format Entry name TPIS_ARATH Primary accession number P48491 Secondary accession number(s) Q9M2T5 integrated into World-2DPAGE Repository (0003) on  October 14, 2008 (release 1) 2D Annotations were last modified on May 18, 2011 (version 2) General Annotations were last modified on  November 15, 2011 (version 2) Name and origin of the protein Description RecName: Full=Triosephosphate isomerase, cytosolic; Short=TIM; Short=Triose-phosphate isomerase; EC=5.3.1.1;. Gene name Name=CTIMC OrderedLocusNames=At3g55440 ORFNames=T22E16.100 Annotated species Arabidopsis thaliana (Mouse-ear cress) [TaxID: 3702] Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core; eudicotyledons; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. References [1]   MAPPING ON GEL PubMed=18656559; DOI=10.1016/j.jprot.2008.06.012; [NCBI, EBI, Israel, Japan] Maldonado A.M., Echevarria-Zomeno S., Jean-Baptiste S., Hernandez M., Jorrin-Novo J.V. ''Evaluation of three different protocols of protein extraction for Arabidopsis thaliana leaf proteome analysis by two-dimensional electrophoresis'' J. Proteomics 71(4):461-472 (2008) 2D PAGE maps for identified proteins How to interpret a protein PHENOL_2 {Phenol 2} Arabidopsis thaliana (Mouse-ear cress) Tissue: Leaf   map experimental info   PHENOL_2 MAP LOCATIONS: SPOT 52: pI=6.17; Mw=30130   [identification data] SPOT 63: pI=6.60; Mw=18210   [identification data] IDENTIFICATION: SPOT 52: SeqCov=38%. Mascot (Protein score/CI%=176/100, Total ion score/CI%=73/100) [1] SPOT 63: SeqCov=40%. Mascot (Protein score/CI%=119/100) [1]. MAPPING (identification): SPOT 52: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]; SPOT 63: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]. TCA-ACETONE_3 {TCA-Acetone 3} Arabidopsis thaliana (Mouse-ear cress) Tissue: Leaf   map experimental info   TCA-ACETONE_3 MAP LOCATIONS: SPOT 52: pI=6.17; Mw=30130   [identification data] SPOT 63: pI=6.60; Mw=18210   [identification data] IDENTIFICATION: SPOT 52: SeqCov=38%. Mascot (Protein score/CI%=176/100, Total ion score/CI%=73/100) [1] SPOT 63: SeqCov=40%. Mascot (Protein score/CI%=119/100) [1]. MAPPING (identification): SPOT 52: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]; SPOT 63: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]. TCA-ACETONE-PHENOL_3 {TCA-Acetone-Phenol 3} Arabidopsis thaliana (Mouse-ear cress) Tissue: Leaf   map experimental info   TCA-ACETONE-PHENOL_3 MAP LOCATIONS: SPOT 52: pI=6.17; Mw=30130   [identification data] SPOT 63: pI=6.60; Mw=18210   [identification data] IDENTIFICATION: SPOT 52: SeqCov=38%. Mascot (Protein score/CI%=176/100, Total ion score/CI%=73/100) [1] SPOT 63: SeqCov=40%. Mascot (Protein score/CI%=119/100) [1]. MAPPING (identification): SPOT 52: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]; SPOT 63: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]. Copyright Data from Dr. Jesus V. Jorrin-Novo, University of Cordoba, Spain Cross-references SWISS-2DPAGE P48491; TPIS_ARATH. UniProtKB/Swiss-Prot P48491; TPIS_ARATH. World-2DPAGE Repository P48491; TPIS_ARATH. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_10 Entry name TPIS_ARATH Primary accession number P48491 Secondary accession number(s) Q9M2T5 Sequence was last modified on  April 27, 2001 (version 2) Annotations were last modified on  October 19, 2011 (version 90) Name and origin of the protein Description RecName: Full=Triosephosphate isomerase, cytosolic; Short=TIM; Short=Triose-phosphate isomerase; EC=5.3.1.1; Gene name Name=CTIMC OrderedLocusNames=At3g55440 ORFNames=T22E16.100 Encoded on Name=CTIMC; OrderedLocusNames=At3g55440; ORFNames=T22E16.100 Keywords Complete proteome; Cytoplasm; Gluconeogenesis; Glycolysis; Isomerase; Pentose shunt; Reference proteome. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL U02949; AAA03449.1; -; mRNA EMBL AL132975; CAB75902.1; -; Genomic_DNA EMBL CP002686; AEE79384.1; -; Genomic_DNA EMBL AF375426; AAK53010.1; -; mRNA EMBL AY074822; AAL69518.1; -; mRNA IPI IPI00549121; -; . PIR T47683; T47683; . PIR T50646; T50646; . RefSeq NP_191104.1; NM_115402.3; . UniGene At.24563; -; . UniGene At.31873; -; . UniGene At.74726; -; . ProteinModelPortal P48491; -; . SMR P48491; 3-247; . IntAct P48491; 2; . STRING P48491; -; . SWISS-2DPAGE P48491; -; . World-2DPAGE 0003:P48491; -; . PRIDE P48491; -; . ProMEX P48491; -; . EnsemblPlants AT3G55440.1; AT3G55440.1; AT3G55440; . GeneID 824710; -; . GenomeReviews BA000014_GR; AT3G55440; . KEGG ath:AT3G55440; -; . NMPDR fig|3702.1.peg.16861; -; . TAIR At3g55440; -; . eggNOG KOG1643; -; . GeneTree EPGT00070000029036; -; . HOGENOM HBG708281; -; . InParanoid P48491; -; . OMA ISGQWPR; -; . PhylomeDB P48491; -; . ProtClustDB PLN02561; -; . BioCyc ARA:AT3G55440-MONOMER; -; . BioCyc MetaCyc:AT3G55440-MONOMER; -; . ArrayExpress P48491; -; . Genevestigator P48491; -; . GermOnline AT3G55440; Arabidopsis thaliana; . GO GO:0048046; C:apoplast; IDA:TAIR; . GO GO:0005618; C:cell wall; IDA:TAIR; . GO GO:0009570; C:chloroplast stroma; IDA:TAIR; . GO GO:0005829; C:cytosol; IDA:TAIR; . GO GO:0005739; C:mitochondrion; IDA:TAIR; . GO GO:0005886; C:plasma membrane; IDA:TAIR; . GO GO:0009506; C:plasmodesma; IDA:TAIR; . GO GO:0005774; C:vacuolar membrane; IDA:TAIR; . GO GO:0005507; F:copper ion binding; IDA:TAIR; . GO GO:0004807; F:triose-phosphate isomerase activity; IDA:TAIR; . GO GO:0006094; P:gluconeogenesis; IEA:UniProtKB-KW; . GO GO:0006096; P:glycolysis; IC:TAIR; . GO GO:0006098; P:pentose-phosphate shunt; IEA:UniProtKB-KW; . GO GO:0046686; P:response to cadmium ion; IEP:TAIR; . GO GO:0009651; P:response to salt stress; IEP:TAIR; . GO GO:0010043; P:response to zinc ion; IEP:TAIR; . InterPro IPR013785; Aldolase_TIM; . InterPro IPR022896; TrioseP_Isoase_bac/euk; . InterPro IPR000652; Triosephosphate_isomerase; . InterPro IPR020861; Triosephosphate_isomerase_AS; . Gene3D G3DSA:3.20.20.70; Aldolase_TIM; 1; . PANTHER PTHR21139; Triophos_ismrse; 1; . Pfam PF00121; TIM; 1; . SUPFAM SSF51351; Triophos_ismrse; 1; . TIGRFAMs TIGR00419; Tim; 1; . PROSITE PS00171; TIM_1; 1; . PROSITE PS51440; TIM_2; 1; . World-2DPAGE Repository (search AC)