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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0003]' for entry matching: Q8W493 World-2DPAGE Repository (0003):  Q8W493 Q8W493 General information about the entry View entry in simple text format Entry name FNRL2_ARATH Primary accession number Q8W493 Secondary accession number(s) Q9LNS9 integrated into World-2DPAGE Repository (0003) on  October 14, 2008 (release 1) 2D Annotations were last modified on May 18, 2011 (version 2) General Annotations were last modified on  November 15, 2011 (version 2) Name and origin of the protein Description RecName: Full=Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic; EC=1.18.1.2; AltName: Full=Leaf FNR 2; Short=AtLFNR2; Short=FNR-2; Flags: Precursor;. Gene name Name=LFNR2 Synonyms=PETH2 OrderedLocusNames=At1g20020 ORFNames=T20H2.20 Annotated species Arabidopsis thaliana (Mouse-ear cress) [TaxID: 3702] Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core; eudicotyledons; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. References [1]   MAPPING ON GEL PubMed=18656559; DOI=10.1016/j.jprot.2008.06.012; [NCBI, EBI, Israel, Japan] Maldonado A.M., Echevarria-Zomeno S., Jean-Baptiste S., Hernandez M., Jorrin-Novo J.V. ''Evaluation of three different protocols of protein extraction for Arabidopsis thaliana leaf proteome analysis by two-dimensional electrophoresis'' J. Proteomics 71(4):461-472 (2008) 2D PAGE maps for identified proteins How to interpret a protein PHENOL_2 {Phenol 2} Arabidopsis thaliana (Mouse-ear cress) Tissue: Leaf   map experimental info   PHENOL_2 MAP LOCATIONS: SPOT 81: pI=6.93; Mw=37730   [identification data] IDENTIFICATION: SPOT 81: SeqCov=21%. Mascot (Protein score/CI%=101/100, Total ion score/CI%=26/96.32) [1]. MAPPING (identification): SPOT 81: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]. TCA-ACETONE_3 {TCA-Acetone 3} Arabidopsis thaliana (Mouse-ear cress) Tissue: Leaf   map experimental info   TCA-ACETONE_3 MAP LOCATIONS: SPOT 81: pI=6.93; Mw=37730   [identification data] IDENTIFICATION: SPOT 81: SeqCov=21%. Mascot (Protein score/CI%=101/100, Total ion score/CI%=26/96.32) [1]. MAPPING (identification): SPOT 81: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]. TCA-ACETONE-PHENOL_3 {TCA-Acetone-Phenol 3} Arabidopsis thaliana (Mouse-ear cress) Tissue: Leaf   map experimental info   TCA-ACETONE-PHENOL_3 MAP LOCATIONS: SPOT 81: pI=6.93; Mw=37730   [identification data] IDENTIFICATION: SPOT 81: SeqCov=21%. Mascot (Protein score/CI%=101/100, Total ion score/CI%=26/96.32) [1]. MAPPING (identification): SPOT 81: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]. Copyright Data from Dr. Jesus V. Jorrin-Novo, University of Cordoba, Spain Cross-references UniProtKB/Swiss-Prot Q8W493; FNRL2_ARATH. World-2DPAGE Repository Q8W493; FNRL2_ARATH. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_10 Entry name FNRL2_ARATH Primary accession number Q8W493 Secondary accession number(s) A8MRF7 A8MRG5 Q9LNS9 Sequence was last modified on  March 1, 2002 (version 1) Annotations were last modified on  October 19, 2011 (version 72) Name and origin of the protein Description RecName: Full=Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic; EC=1.18.1.2; AltName: Full=Leaf FNR 2; Short=AtLFNR2; Short=FNR-2; Flags: Precursor; Gene name Name=LFNR2 Synonyms=PETH2 OrderedLocusNames=At1g20020 ORFNames=T20H2.20 Encoded on Name=LFNR2; Synonyms=PETH2; OrderedLocusNames=At1g20020; ORFNames=T20H2.20 Keywords Alternative splicing; Chloroplast; Complete proteome; Direct protein sequencing; Disulfide bond; Electron transport; FAD; Flavoprotein; Membrane; NADP; Oxidoreductase; Photosynthesis; Plastid; Reference proteome; Thylakoid; Transit peptide; Transport. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AC022472; AAF79911.1; ALT_SEQ; Genomic_DNA EMBL CP002684; AEE29923.1; -; Genomic_DNA EMBL CP002684; AEE29924.1; -; Genomic_DNA EMBL CP002684; AEE29925.1; -; Genomic_DNA EMBL AY062739; AAL32817.1; -; mRNA EMBL AY114663; AAM47982.1; -; mRNA IPI IPI00533005; -; . IPI IPI00846901; -; . IPI IPI00846969; -; . PIR F86333; F86333; . RefSeq NP_001077565.1; NM_001084096.2; . RefSeq NP_001077566.1; NM_001084097.1; . RefSeq NP_173431.1; NM_101857.5; . UniGene At.24499; -; . HSSP P00455; 1FNC; . ProteinModelPortal Q8W493; -; . SMR Q8W493; 74-369; . IntAct Q8W493; 2; . STRING Q8W493; -; . World-2DPAGE 0003:Q8W493; -; . PRIDE Q8W493; -; . ProMEX Q8W493; -; . EnsemblPlants AT1G20020.1; AT1G20020.1; AT1G20020; . GeneID 838591; -; . GenomeReviews CT485782_GR; AT1G20020; . KEGG ath:AT1G20020; -; . NMPDR fig|3702.1.peg.2350; -; . TAIR At1g20020; -; . eggNOG KOG1158; -; . GeneTree EPGT00050000004317; -; . HOGENOM HBG353752; -; . InParanoid Q8W493; -; . OMA GIDWFDY; -; . ProtClustDB PLN03115; -; . BioCyc ARA:AT1G20020-MONOMER; -; . ArrayExpress Q8W493; -; . Genevestigator Q8W493; -; . GO GO:0048046; C:apoplast; IDA:TAIR; . GO GO:0009570; C:chloroplast stroma; IDA:TAIR; . GO GO:0009535; C:chloroplast thylakoid membrane; IDA:TAIR; . GO GO:0004324; F:ferredoxin-NADP+ reductase activity; IEA:EC; . GO GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro; . GO GO:0050661; F:NADP binding; IEA:InterPro; . GO GO:0008266; F:poly(U) RNA binding; IDA:TAIR; . GO GO:0042742; P:defense response to bacterium; IEP:TAIR; . GO GO:0009817; P:defense response to fungus; incompatible interaction; IDA:TAIR GO GO:0022900; P:electron transport chain; IEA:UniProtKB-KW; . GO GO:0015979; P:photosynthesis; IEA:UniProtKB-KW; . GO GO:0006810; P:transport; IEA:UniProtKB-KW; . InterPro IPR012146; Fd-NADP+_RD; . InterPro IPR017927; Fd_Rdtase_FAD-bd; . InterPro IPR015701; Fd_Red; . InterPro IPR001709; Flavoprot_Pyr_Nucl_cyt_Rdtase; . InterPro IPR008333; OxRdtase_FAD-bd_dom; . InterPro IPR001433; OxRdtase_FAD/NAD-bd; . InterPro IPR017938; Riboflavin_synthase-like_b-brl; . PANTHER PTHR19384:SF1; FRD_Red; 1; . Pfam PF00970; FAD_binding_6; 1; . Pfam PF00175; NAD_binding_1; 1; . PIRSF PIRSF000361; Frd-NADP+_RD; 1; . PRINTS PR00371; FPNCR; . SUPFAM SSF63380; Riboflavin_synthase_like_b-brl; 1; . PROSITE PS51384; FAD_FR; 1; . World-2DPAGE Repository (search AC)