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Searching in 'World-2DPAGE Repository [0004]' for entry matching: AATC_RAT

World-2DPAGE Repository (0004):  AATC_RAT


General information about the entry
View entry in simple text format
Entry nameAATC_RAT
Primary accession numberP13221
integrated into World-2DPAGE Repository (0004) on October 13, 2008 (release 1)
2D Annotations were last modified onMay 18, 2011 (version 2)
General Annotations were last modified on December 22, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Aspartate aminotransferase, cytoplasmic; EC=; AltName: Full=Glutamate oxaloacetate transaminase 1; AltName: Full=Transaminase A;.
Gene nameName=Got1
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
  map experimental info

pI=7.07; Mw=44000  [identification data]

MAPPING (identification):
SPOT 442: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
UniProtKB/Swiss-ProtP13221; AATC_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameAATC_RAT
Primary accession numberP13221
Secondary accession number(s) Q64570 Q6P721
Sequence was last modified on January 23, 2007 (version 3)
Annotations were last modified on November 16, 2011 (version 102)
Name and origin of the protein
DescriptionRecName: Full=Aspartate aminotransferase, cytoplasmic; EC=; AltName: Full=Glutamate oxaloacetate transaminase 1; AltName: Full=Transaminase A;
Gene nameName=Got1
Encoded onName=Got1
KeywordsAminotransferase; Complete proteome; Cytoplasm; Direct protein sequencing; Phosphoprotein; Pyridoxal phosphate; Reference proteome; Transferase.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLJ04171; AAA40769.1; -; mRNA
EMBLD00252; BAA00183.1; -; mRNA
EMBLBC061877; AAH61877.1; -; mRNA
EMBLJ05263; AAA40842.1; -; Genomic_DNA
IPIIPI00421513; -; .
PIRI55325; I55325; .
PIRJT0439; JT0439; .
RefSeqNP_036703.1; NM_012571.1; .
UniGeneRn.5819; -; .
ProteinModelPortalP13221; -; .
SMRP13221; 2-413; .
STRINGP13221; -; .
PhosphoSiteP13221; -; .
World-2DPAGE0004:P13221; -; .
PRIDEP13221; -; .
EnsemblENSRNOT00000022309; ENSRNOP00000022309; ENSRNOG00000016356; .
GeneID24401; -; .
KEGGrno:24401; -; .
UCSCNM_012571; rat; .
CTD2805; -; .
RGD2721; Got1; .
eggNOGroNOG05319; -; .
GeneTreeENSGT00390000014081; -; .
HOVERGENHBG000951; -; .
InParanoidP13221; -; .
OrthoDBEOG47D9G5; -; .
PhylomeDBP13221; -; .
BioCycMetaCyc:MONOMER-12468; -; .
NextBio603203; -; .
ArrayExpressP13221; -; .
GenevestigatorP13221; -; .
GermOnlineENSRNOG00000016356; Rattus norvegicus; .
GOGO:0043679; C:axon terminus; IDA:RGD; .
GOGO:0005829; C:cytosol; TAS:RGD; .
GOGO:0005764; C:lysosome; IDA:RGD; .
GOGO:0005625; C:soluble fraction; IDA:RGD; .
GOGO:0031406; F:carboxylic acid binding; IDA:RGD; .
GOGO:0004069; F:L-aspartate:2-oxoglutarate aminotransferase activity; ISS:UniProtKB; .
GOGO:0080130; F:L-phenylalanine:2-oxoglutarate aminotransferase activity; IEA:EC; .
GOGO:0030170; F:pyridoxal phosphate binding; IEA:InterPro; .
GOGO:0006103; P:2-oxoglutarate metabolic process; ISS:UniProtKB; .
GOGO:0009058; P:biosynthetic process; IEA:InterPro; .
GOGO:0006536; P:glutamate metabolic process; ISS:UniProtKB; .
InterProIPR004839; Aminotransferase_I/II; .
InterProIPR000796; Asp_trans; .
InterProIPR004838; NHTrfase_class1_PyrdxlP-BS; .
InterProIPR015424; PyrdxlP-dep_Trfase_major_dom; .
InterProIPR015421; PyrdxlP-dep_Trfase_major_sub1; .
Gene3DG3DSA:3.40.640.10; PyrdxlP-dep_Trfase_major_sub1; 1; .
KOK14454; -; .
PANTHERPTHR11879; Asp_trans; 1; .
PfamPF00155; Aminotran_1_2; 1; .
SUPFAMSSF53383; PyrdxlP-dep_Trfase_major; 1; .

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World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server