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World-2DPAGE Repository
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Searching in 'World-2DPAGE Repository [0014]' for entry
matching:
ACL6B_RAT
World-2DPAGE Repository
(0014):
ACL6B_RAT
ACL6B_RAT
General information about the entry
View entry in simple text format
Entry name
ACL6B_RAT
Primary accession number
P86173
integrated into World-2DPAGE Repository (0014) on
October 13, 2008 (release 1)
2D Annotations were last modified on
June 1, 2011 (version 3)
General Annotations were last modified on
November 25, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Actin-like protein 6B; AltName: Full=BRG1-associated factor 53B; Short=BAF53B;.
Gene name
Name=Actl6b
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.200900680
;
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein
RAT_CEREBELLUM_21D
{Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
map experimental info
RAT_CEREBELLUM_21D
MAP LOCATIONS:
SPOT 2901
:
pI=5.64; Mw=48000
[identification data]
IDENTIFICATION:
SPOT 2901: SeqCov=33%. MascotPMF=82 [
1
].
MAPPING (identification):
SPOT
2901
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
PRIDE
10017.
UniProtKB/Swiss-Prot
P86173; ACL6B_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
ACL6B_RAT
Primary accession number
P86173
Secondary accession number(s)
A6J021
Sequence was last modified on
October 13, 2009 (version 2)
Annotations were last modified on
November 16, 2011 (version 28)
Name and origin of the protein
Description
RecName: Full=Actin-like protein 6B; AltName: Full=BRG1-associated factor 53B; Short=BAF53B;
Gene name
Name=Actl6b
Encoded on
Name=Actl6b
Keywords
Chromatin regulator
;
Complete proteome
;
Neurogenesis
;
Nucleus
;
Reference proteome
;
Transcription
;
Transcription regulation
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
CH473973; EDM13260.1
; -; Genomic_DNA
IPI
IPI00923128; -
; .
RefSeq
NP_001099387.2; NM_001105917.1
; .
UniGene
Rn.44972; -
; .
ProteinModelPortal
P86173; -
; .
SMR
P86173; 8-425
; .
STRING
P86173; -
; .
PhosphoSite
P86173; -
; .
PRIDE
P86173; -
; .
Ensembl
ENSRNOT00000001910; ENSRNOP00000001910
; ENSRNOG00000001408; .
GeneID
288563; -
; .
KEGG
rno:288563; -
; .
CTD
51412; -
; .
RGD
1307763; Actl6b
; .
GeneTree
ENSGT00560000076554; -
; .
HOVERGEN
HBG003771; -
; .
OMA
PPNWKKE; -
; .
OrthoDB
EOG4XKV6Z; -
; .
Genevestigator
P86173; -
; .
GO
GO:0071565; C:nBAF complex
; ISS:UniProtKB; .
GO
GO:0005524; F:ATP binding
; IEA:InterPro; .
GO
GO:0016568; P:chromatin modification
; IEA:UniProtKB-KW; .
GO
GO:0007399; P:nervous system development
; IEA:UniProtKB-KW; .
GO
GO:0006355; P:regulation of transcription
; DNA-dependent; IEA:UniProtKB-KW
GO
GO:0006351; P:transcription
; DNA-dependent; IEA:UniProtKB-KW
InterPro
IPR004000; Actin-like
; .
InterPro
IPR004001; Actin_CS
; .
KO
K11652; -
; .
PANTHER
PTHR11937; Actin_like
; 1; .
Pfam
PF00022; Actin
; 1; .
PRINTS
PR00190; ACTIN
; .
SMART
SM00268; ACTIN
; 1; .
PROSITE
PS00432; ACTINS_2
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
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Make2D-DB II
package (
ver. 3.10.2
) from the
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