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Searching in 'World-2DPAGE Repository [0022]' for entry matching: ACTC_RAT




World-2DPAGE Repository (0022):  ACTC_RAT

ACTC_RAT


General information about the entry
View entry in simple text format
Entry nameACTC_RAT
Primary accession numberP68035
integrated into World-2DPAGE Repository (0022) on May 7, 2010 (release 1)
2D Annotations were last modified onJune 22, 2011 (version 2)
General Annotations were last modified on November 24, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Actin, alpha cardiac muscle 1; AltName: Full=Alpha-cardiac actin; Flags: Precursor;.
Gene nameName=Actc1
Synonyms=Actc
Annotated speciesRattus [TaxID: 10114]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000593;
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

HCR_LCR_HEART {HCR LCR Cardiac Map}
Rattus
Tissue: Heart
HCR_LCR_HEART
  map experimental info 		 
HCR_LCR_HEART

MAP LOCATIONS:
pI=5.23; Mw=42334  [identification data]
pI=5.23; Mw=42334  [identification data]
pI=5.23; Mw=42334  [identification data]
pI=5.23; Mw=42334  [identification data]
pI=5.23; Mw=42334  [identification data]

IDENTIFICATION: SPOT 418: SeqCov=30%. Peptides MS=11/20. Mascot PMF Score=107 [1]
SPOT 467: SeqCov=20.7%. Peptides MS=7/20. Mascot PMF Score=53 [1]; SPOT 531: SeqCov=28.6%. Peptides MS=9/20. Mascot PMF Score=80 [1]; SPOT 736: SeqCov=32.1%. Peptides MS=12/20. Mascot PMF Score=122 [1]; SPOT 879: SeqCov=30%. Peptides MS=11/20. Mascot PMF Score=107 [1].
PEPTIDE EVIDENCE: SPOT 418: 329-IIAPPER-335 (24) / 85-IWHHTFYNELR-95 (79) / 239-SYELPDGQVITIGNER-254 (88) [1]
SPOT 467: 329-IIAPPER-335 (21) / 85-IWHHTFYNELR-95 (74) / 239-SYELPDGQVITIGNER-254 (111) [1]; SPOT 531: 329-IIAPPER-335 (14) / 85-IWHHTFYNELR-95 (71) / 239-SYELPDGQVITIGNER-254 (62) [1]; SPOT 879: 329-IIAPPER-335 (35) / 85-IWHHTFYNELR-95 (66) / 239-SYELPDGQVITIGNER-254 (103) [1].
MAPPING (identification):
SPOT 418: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 467: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 531: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 736: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 879: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Jatin Burniston, Liverpool John Moores University, UK
Cross-references
UniProtKB/Swiss-ProtP68035; ACTC_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameACTC_RAT
Primary accession numberP68035
Secondary accession number(s) A0JPJ4 P04270
Sequence was last modified on March 20, 1987 (version 1)
Annotations were last modified on November 16, 2011 (version 60)
Name and origin of the protein
DescriptionRecName: Full=Actin, alpha cardiac muscle 1; AltName: Full=Alpha-cardiac actin; Flags: Precursor;
Gene nameName=Actc1
Synonyms=Actc
Encoded onName=Actc1; Synonyms=Actc
KeywordsAcetylation; ATP-binding; Complete proteome; Cytoplasm; Cytoskeleton; Methylation; Muscle protein; Nucleotide-binding; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLX80130; CAA56429.1; -; mRNA
EMBLBC127451; AAI27452.1; -; mRNA
IPIIPI00194087; -; .
RefSeqNP_062056.1; NM_019183.1; .
UniGeneRn.3114; -; .
ProteinModelPortalP68035; -; .
SMRP68035; 6-377; .
STRINGP68035; -; .
PhosphoSiteP68035; -; .
Rat-heart-2DPAGEP68035; -; .
PRIDEP68035; -; .
EnsemblENSRNOT00000011773; ENSRNOP00000011773; ENSRNOG00000008536; .
GeneID29275; -; .
KEGGrno:29275; -; .
UCSCNM_019183; rat; .
CTD70; -; .
RGD2026; Actc1; .
eggNOGmaNOG16686; -; .
GeneTreeENSGT00590000082732; -; .
HOVERGENHBG003771; -; .
InParanoidP68035; -; .
OMAGERFRCP; -; .
PhylomeDBP68035; -; .
NextBio608635; -; .
ArrayExpressP68035; -; .
GenevestigatorP68035; -; .
GermOnlineENSRNOG00000008536; Rattus norvegicus; .
GOGO:0005625; C:soluble fraction; IDA:RGD; .
GOGO:0005524; F:ATP binding; IEA:UniProtKB-KW; .
GOGO:0060048; P:cardiac muscle contraction; IDA:RGD; .
GOGO:0042493; P:response to drug; IEP:RGD; .
GOGO:0045471; P:response to ethanol; IEP:RGD; .
InterProIPR004000; Actin-like; .
InterProIPR020902; Actin/actin-like_CS; .
InterProIPR004001; Actin_CS; .
KOK12314; -; .
PANTHERPTHR11937; Actin_like; 1; .
PfamPF00022; Actin; 1; .
PRINTSPR00190; ACTIN; .
SMARTSM00268; ACTIN; 1; .
PROSITEPS00406; ACTINS_1; 1; .
PROSITEPS00432; ACTINS_2; 1; .
PROSITEPS01132; ACTINS_ACT_LIKE; 1; .


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