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Searching in 'World-2DPAGE Repository [0019]' for entry matching: ARF1_HUMAN




World-2DPAGE Repository (0019):  ARF1_HUMAN


ARF1_HUMAN


General information about the entry
View entry in simple text format
Entry nameARF1_HUMAN
Primary accession numberP84077
integrated into World-2DPAGE Repository (0019) on December 9, 2009 (release 1)
2D Annotations were last modified onMay 30, 2011 (version 2)
General Annotations were last modified on January 13, 2012 (version 2)
Name and origin of the protein
DescriptionRecName: Full=ADP-ribosylation factor 1;.
Gene nameName=ARF1
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1111/j.1471-4159.2010.06719.x;
VanGuilder H.D., Yan H., Farley J.A., Sonntag W.E., Freeman W.M.
''Aging alters the expression of neurotransmission-regulating proteins in the hippocampal synaptoproteome''
J of Neurochemistry 113(6):1577-1588 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

HIPP_SYNAP {Rat hippocampal synaptoproteome}
Rattus norvegicus (Rat)
Tissue: Hippocampus
HIPP_SYNAP
  map experimental info
 
HIPP_SYNAP

MAP LOCATIONS:
pI=6.32; Mw=20740  [identification data]
pI=6.32; Mw=20740  [identification data]
pI=6.32; Mw=20740  [identification data]

IDENTIFICATION: SPOT 872: Peptides number=4. SeqCov=18.9%. MOWSE score=3.43E+3 [1]
SPOT 1044: Peptides number=3. SeqCov=17.7%. MOWSE score=8.55E+2 [1]; SPOT 1045: Peptides number=8. SeqCov=43.6%. MOWSE score=2.24E+9 [1].
MAPPING (identification):
SPOT 872: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 1044: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 1045: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Willard Freeman, Penn State College of Medicine, USA
Cross-references
UniProtKB/Swiss-ProtP84077; ARF1_HUMAN.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameARF1_HUMAN
Primary accession numberP84077
Secondary accession number(s) P10947 P32889
Sequence was last modified on January 23, 2007 (version 2)
Annotations were last modified on December 14, 2011 (version 95)
Name and origin of the protein
DescriptionRecName: Full=ADP-ribosylation factor 1;
Gene nameName=ARF1
Encoded onName=ARF1
Keywords3D-structure; Complete proteome; Cytoplasm; Direct protein sequencing; ER-Golgi transport; Golgi apparatus; GTP-binding; Lipoprotein; Myristate; Nucleotide-binding; Phosphoprotein; Protein transport; Reference proteome; Transport.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLM36340; AAA35552.1; -; mRNA
EMBLM84326; AAA35512.1; -; mRNA
EMBLAF052179; AAC28623.1; -; mRNA
EMBLAF055002; AAC09356.1; -; mRNA
EMBLAF493881; AAM12595.1; -; mRNA
EMBLBT007393; AAP36057.1; -; mRNA
EMBLAL136379; CAI23120.1; -; Genomic_DNA
EMBLBC009247; AAH09247.1; -; mRNA
EMBLBC010429; AAH10429.1; -; mRNA
EMBLBC011358; AAH11358.1; -; mRNA
EMBLM84332; AAA35511.1; -; Genomic_DNA
IPIIPI00215914; -; .
PIRB40187; A33283; .
RefSeqNP_001019397.1; NM_001024226.1; .
RefSeqNP_001019398.1; NM_001024227.1; .
RefSeqNP_001019399.1; NM_001024228.1; .
RefSeqNP_001649.1; NM_001658.3; .
UniGeneHs.286221; -; .
PDB1HUR; X-ray; 2.00 A; A/B=2-181
PDB1RE0; X-ray; 2.40 A; A=18-181
PDB1U81; NMR; -; A=18-180
PDB3O47; X-ray; 2.80 A; A/B=11-181
PDBsum1HUR; -; .
PDBsum1RE0; -; .
PDBsum1U81; -; .
PDBsum3O47; -; .
ProteinModelPortalP84077; -; .
SMRP84077; 2-180; .
DIPDIP-31597N; -; .
IntActP84077; 23; .
MINTMINT-4999599; -; .
STRINGP84077; -; .
PhosphoSiteP84077; -; .
DMDM51316985; -; .
PeptideAtlasP84077; -; .
PRIDEP84077; -; .
EnsemblENST00000272102; ENSP00000272102; ENSG00000143761; .
GeneID375; -; .
KEGGhsa:375; -; .
UCSCuc001hrr.1; human; .
CTD375; -; .
GeneCardsGC01P198785; -; .
H-InvDBHIX0001656; -; .
HGNCHGNC:652; ARF1; .
HPACAB007742; -; .
MIM103180; gene; .
neXtProtNX_P84077; -; .
PharmGKBPA24934; -; .
eggNOGprNOG09478; -; .
GeneTreeENSGT00570000078761; -; .
HOGENOMHBG745225; -; .
HOVERGENHBG002073; -; .
InParanoidP84077; -; .
OMANDRDRMR; -; .
OrthoDBEOG4PZJ7Q; -; .
PhylomeDBP84077; -; .
Pathway_Interaction_DBarf_3pathway; Arf1 pathway; .
Pathway_Interaction_DBarf6downstreampathway; Arf6 downstream pathway; .
Pathway_Interaction_DBpi3kcipathway; Class I PI3K signaling events; .
ReactomeREACT_11123; Membrane Trafficking; .
ReactomeREACT_6185; HIV Infection; .
NextBio1569; -; .
ArrayExpressP84077; -; .
BgeeP84077; -; .
CleanExHS_ARF1; -; .
GenevestigatorP84077; -; .
GermOnlineENSG00000143761; Homo sapiens; .
GOGO:0005829; C:cytosol; TAS:Reactome; .
GOGO:0000139; C:Golgi membrane; TAS:Reactome; .
GOGO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell; .
GOGO:0005886; C:plasma membrane; TAS:ProtInc; .
GOGO:0005525; F:GTP binding; IEA:UniProtKB-KW; .
GOGO:0003924; F:GTPase activity; TAS:ProtInc; .
GOGO:0005515; F:protein binding; IPI:IntAct; .
GOGO:0005057; F:receptor signaling protein activity; TAS:ProtInc; .
GOGO:0006878; P:cellular copper ion homeostasis; IMP:UniProtKB; .
GOGO:0048205; P:COPI coating of Golgi vesicle; TAS:Reactome; .
GOGO:0006892; P:post-Golgi vesicle-mediated transport; TAS:Reactome; .
GOGO:0015031; P:protein transport; IEA:UniProtKB-KW; .
GOGO:0050690; P:regulation of defense response to virus by virus; TAS:Reactome; .
GOGO:0006890; P:retrograde vesicle-mediated transport; Golgi to ER; TAS:Reactome
GOGO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro; .
GOGO:0016032; P:viral reproduction; TAS:Reactome; .
InterProIPR005225; Small_GTP-bd_dom; .
InterProIPR024156; Small_GTPase_ARF; .
InterProIPR006689; Small_GTPase_ARF/SAR; .
KOK07937; -; .
PANTHERPTHR11711; ARF/SAR; 1; .
PfamPF00025; Arf; 1; .
PRINTSPR00328; SAR1GTPBP; .
SMARTSM00177; ARF; 1; .
TIGRFAMsTIGR00231; Small_GTP; 1; .
PROSITEPS51417; ARF; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server