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Searching in 'World-2DPAGE Repository [0030]' for entry matching: B0BNE6

World-2DPAGE Repository (0030):  B0BNE6


General information about the entry
View entry in simple text format
Entry nameB0BNE6_RAT
Primary accession numberB0BNE6
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionSubName: Full=NADH dehydrogenase (Ubiquinone) Fe-S protein 8 (Predicted), isoform CRA_a; SubName: Full=Ndufs8 protein; SubName: Full=Uncharacterized protein;.
Gene nameName=Ndufs8
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
  map experimental info

pI=5.05; Mw=24269  [identification data]

IDENTIFICATION: SPOT 2299: Mascot protein score=176. Number of peptides=2 [1].
MAPPING (identification):
SPOT 2299: Tandem mass spectrometry [1].

Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
World-2DPAGE RepositoryB0BNE6; B0BNE6_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/TrEMBL
Extracted from UniProtKB/TrEMBL, release: 2011_11
Entry nameB0BNE6_RAT
Primary accession numberB0BNE6
Sequence was last modified on February 26, 2008 (version 1)
Annotations were last modified on November 16, 2011 (version 40)
Name and origin of the protein
DescriptionSubName: Full=NADH dehydrogenase (Ubiquinone) Fe-S protein 8 (Predicted), isoform CRA_a; SubName: Full=Ndufs8 protein; SubName: Full=Uncharacterized protein;
Gene nameName=Ndufs8
Encoded onName=Ndufs8; Synonyms=Ndufs8_predicted; ORFNames=rCG_47133
KeywordsComplete proteome; Reference proteome; Ubiquinone.
EMBLBC158791; AAI58792.1; -; mRNA
EMBLCH473953; EDM12318.1; -; Genomic_DNA
EMBLCH473953; EDM12319.1; -; Genomic_DNA
EMBLCH473953; EDM12320.1; -; Genomic_DNA
IPIIPI00188330; -; .
RefSeqNP_001099792.1; NM_001106322.2; .
UniGeneRn.3373; -; .
ProteinModelPortalB0BNE6; -; .
EnsemblENSRNOT00000023526; ENSRNOP00000023526; ENSRNOG00000017446; .
GeneID293652; -; .
KEGGrno:293652; -; .
CTD4728; -; .
RGD1309436; Ndufs8; .
eggNOGroNOG13235; -; .
GeneTreeENSGT00390000003049; -; .
HOVERGENHBG006547; -; .
OrthoDBEOG43R3NR; -; .
PhylomeDBB0BNE6; -; .
NextBio636638; -; .
GenevestigatorB0BNE6; -; .
GOGO:0051539; F:4 iron; 4 sulfur cluster binding; IEA:InterPro
GOGO:0009055; F:electron carrier activity; IEA:InterPro; .
HAMAPMF_01351; NDH1_NuoI; 1; -
InterProIPR001450; 4Fe4S-bd_dom; .
InterProIPR017896; 4Fe4S_Fe-S-bd; .
InterProIPR017900; 4Fe4S_Fe_S_CS; .
InterProIPR012285; Fum_reductase_C; .
InterProIPR010226; NADH_quinone_OxRdtase_chainI; .
Gene3DG3DSA:1.10.1060.10; Fum_reductase_C; 1; .
KOK03941; -; .
PfamPF12838; Fer4_7; 1; .
TIGRFAMsTIGR01971; NuoI; 1; .
PROSITEPS00198; 4FE4S_FER_1; 2; .
PROSITEPS51379; 4FE4S_FER_2; 2; .

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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server