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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0030]' for entry matching: B0BNE6_RAT World-2DPAGE Repository (0030):  B0BNE6_RAT B0BNE6_RAT General information about the entry View entry in simple text format Entry name B0BNE6_RAT Primary accession number B0BNE6 integrated into World-2DPAGE Repository (0030) on  November 9, 2010 (release 1) 2D Annotations were last modified on June 21, 2011 (version 2) General Annotations were last modified on  November 23, 2011 (version 2) Name and origin of the protein Description SubName: Full=NADH dehydrogenase (Ubiquinone) Fe-S protein 8 (Predicted), isoform CRA_a; SubName: Full=Ndufs8 protein; SubName: Full=Uncharacterized protein;. Gene name Name=Ndufs8 Synonyms=Ndufs8_predicted ORFNames=rCG_47133 Annotated species Rattus norvegicus (Rat) [TaxID: 10116] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus. References [1]   2D-PAGE GEL CHARACTERIZATION DOI=10.1002/pmic.201000006; D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C. ''Two-dimensional gel proteome reference map of INS-1E cells'' Proteomics 11(7):1365-1369 (2011) 2D PAGE maps for identified proteins How to interpret a protein RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7} Rattus norvegicus (Rat)   map experimental info   RAT_INS1E_4-7 MAP LOCATIONS: SPOT 2299: pI=5.05; Mw=24269   [identification data] IDENTIFICATION: SPOT 2299: Mascot protein score=176. Number of peptides=2 [1]. MAPPING (identification): SPOT 2299: Tandem mass spectrometry [1]. Copyright Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium Cross-references UniProtKB/TrEMBL B0BNE6; B0BNE6_RAT. World-2DPAGE Repository B0BNE6; B0BNE6_RAT. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/TrEMBL Extracted from UniProtKB/TrEMBL, release: 2011_11 Entry name B0BNE6_RAT Primary accession number B0BNE6 Sequence was last modified on  February 26, 2008 (version 1) Annotations were last modified on  November 16, 2011 (version 40) Name and origin of the protein Description SubName: Full=NADH dehydrogenase (Ubiquinone) Fe-S protein 8 (Predicted), isoform CRA_a; SubName: Full=Ndufs8 protein; SubName: Full=Uncharacterized protein; Gene name Name=Ndufs8 Synonyms=Ndufs8_predicted ORFNames=rCG_47133 Encoded on Name=Ndufs8; Synonyms=Ndufs8_predicted; ORFNames=rCG_47133 Keywords Complete proteome; Reference proteome; Ubiquinone. Cross-references EMBL BC158791; AAI58792.1; -; mRNA EMBL CH473953; EDM12318.1; -; Genomic_DNA EMBL CH473953; EDM12319.1; -; Genomic_DNA EMBL CH473953; EDM12320.1; -; Genomic_DNA IPI IPI00188330; -; . RefSeq NP_001099792.1; NM_001106322.2; . UniGene Rn.3373; -; . ProteinModelPortal B0BNE6; -; . STRING B0BNE6; -; . PRIDE B0BNE6; -; . Ensembl ENSRNOT00000023526; ENSRNOP00000023526; ENSRNOG00000017446; . GeneID 293652; -; . KEGG rno:293652; -; . CTD 4728; -; . RGD 1309436; Ndufs8; . eggNOG roNOG13235; -; . GeneTree ENSGT00390000003049; -; . HOVERGEN HBG006547; -; . OMA TIESEER; -; . OrthoDB EOG43R3NR; -; . PhylomeDB B0BNE6; -; . NextBio 636638; -; . Genevestigator B0BNE6; -; . GO GO:0051539; F:4 iron; 4 sulfur cluster binding; IEA:InterPro GO GO:0009055; F:electron carrier activity; IEA:InterPro; . HAMAP MF_01351; NDH1_NuoI; 1; - InterPro IPR001450; 4Fe4S-bd_dom; . InterPro IPR017896; 4Fe4S_Fe-S-bd; . InterPro IPR017900; 4Fe4S_Fe_S_CS; . InterPro IPR012285; Fum_reductase_C; . InterPro IPR010226; NADH_quinone_OxRdtase_chainI; . Gene3D G3DSA:1.10.1060.10; Fum_reductase_C; 1; . KO K03941; -; . Pfam PF12838; Fer4_7; 1; . TIGRFAMs TIGR01971; NuoI; 1; . PROSITE PS00198; 4FE4S_FER_1; 2; . PROSITE PS51379; 4FE4S_FER_2; 2; . World-2DPAGE Repository (search AC)