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Searching in 'World-2DPAGE Repository [0014]' for entry matching: B0BNJ1




World-2DPAGE Repository (0014):  B0BNJ1


B0BNJ1


General information about the entry
View entry in simple text format
Entry nameB0BNJ1_RAT
Primary accession numberB0BNJ1
Secondary accession number(s) GI|189491879
integrated into World-2DPAGE Repository (0014) on October 13, 2008 (release 1)
2D Annotations were last modified onJune 1, 2011 (version 3)
General Annotations were last modified on November 25, 2011 (version 2)
Name and origin of the protein
DescriptionSubName: Full=LOC683667 protein;.
Gene nameName=Sri
Synonyms=LOC683667
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.200900680;
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_CEREBELLUM_21D {Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
RAT_CEREBELLUM_21D
  map experimental info
 
RAT_CEREBELLUM_21D

MAP LOCATIONS:
pI=5.36; Mw=18000  [identification data]

IDENTIFICATION: SPOT 3224: SeqCov=55%. MascotPMF=108 [1].
MAPPING (identification):
SPOT 3224: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
NCBI_Protein189491879.
NCBI_ProteinGI|189491879.
PRIDE10017.
UniProtKB/TrEMBLB0BNJ1; B0BNJ1_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/TrEMBL
Extracted from UniProtKB/TrEMBL, release: 2011_11
Entry nameB0BNJ1_RAT
Primary accession numberB0BNJ1
Sequence was last modified on February 26, 2008 (version 1)
Annotations were last modified on September 21, 2011 (version 28)
Name and origin of the protein
DescriptionSubName: Full=LOC683667 protein;
Gene nameName=Sri
Synonyms=LOC683667
Encoded onName=Sri; Synonyms=LOC683667
KeywordsCalcium.
Cross-references
EMBLBC158845; AAI58846.1; -; mRNA
IPIIPI00886430; -; .
RefSeqNP_001121662.1; NM_001128190.1; .
UniGeneRn.216447; -; .
ProteinModelPortalB0BNJ1; -; .
SMRB0BNJ1; 27-198; .
PRIDEB0BNJ1; -; .
GeneID683667; -; .
KEGGrno:683667; -; .
CTD6717; -; .
RGD1584485; Sri; .
eggNOGroNOG07185; -; .
HOVERGENHBG004492; -; .
NextBio725655; -; .
GenevestigatorB0BNJ1; -; .
GOGO:0005509; F:calcium ion binding; IEA:InterPro; .
InterProIPR011992; EF-hand-like_dom; .
InterProIPR018247; EF_Hand_1_Ca_BS; .
InterProIPR018249; EF_HAND_2; .
InterProIPR002048; EF_hand_Ca-bd; .
Gene3DG3DSA:1.10.238.10; EF-Hand_type; 1; .
SMARTSM00054; EFh; 2; .
PROSITEPS00018; EF_HAND_1; 2; .
PROSITEPS50222; EF_HAND_2; 4; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server