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Searching in 'World-2DPAGE Repository [0014]' for entry matching: B4F772_RAT




World-2DPAGE Repository (0014):  B4F772_RAT


B4F772_RAT


General information about the entry
View entry in simple text format
Entry nameB4F772_RAT
Primary accession numberB4F772
integrated into World-2DPAGE Repository (0014) on October 13, 2008 (release 1)
2D Annotations were last modified onJune 1, 2011 (version 3)
General Annotations were last modified on November 25, 2011 (version 2)
Name and origin of the protein
DescriptionSubName: Full=Heat shock 70kDa protein 4-like (Predicted), isoform CRA_b; SubName: Full=Hspa4l protein; SubName: Full=Uncharacterized protein;.
Gene nameName=Hspa4l
Synonyms=Hspa4l_predicted
ORFNames=rCG_41537
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.200900680;
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_CEREBELLUM_21D {Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
RAT_CEREBELLUM_21D
  map experimental info
 
RAT_CEREBELLUM_21D

MAP LOCATIONS:
pI=5.69; Mw=75000  [identification data]

IDENTIFICATION: SPOT 2694: SeqCov=33%. MascotPMF=150 [1].
MAPPING (identification):
SPOT 2694: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
PRIDE10017.
UniProtKB/TrEMBLB4F772; B4F772_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/TrEMBL
Extracted from UniProtKB/TrEMBL, release: 2011_11
Entry nameB4F772_RAT
Primary accession numberB4F772
Sequence was last modified on September 23, 2008 (version 1)
Annotations were last modified on November 16, 2011 (version 27)
Name and origin of the protein
DescriptionSubName: Full=Heat shock 70kDa protein 4-like (Predicted), isoform CRA_b; SubName: Full=Hspa4l protein; SubName: Full=Uncharacterized protein;
Gene nameName=Hspa4l
Synonyms=Hspa4l_predicted
ORFNames=rCG_41537
Encoded onName=Hspa4l; Synonyms=Hspa4l_predicted; ORFNames=rCG_41537
KeywordsATP-binding; Complete proteome; Nucleotide-binding; Reference proteome; Stress response.
Cross-references
EMBLBC168157; AAI68157.1; -; mRNA
EMBLCH473961; EDM01329.1; -; Genomic_DNA
IPIIPI00372183; -; .
RefSeqNP_001099898.2; NM_001106428.2; .
UniGeneRn.144829; -; .
ProteinModelPortalB4F772; -; .
STRINGB4F772; -; .
EnsemblENSRNOT00000015474; ENSRNOP00000015474; ENSRNOG00000010819; .
GeneID294993; -; .
KEGGrno:294993; -; .
CTD22824; -; .
RGD1306528; Hspa4l; .
eggNOGmaNOG18275; -; .
GeneTreeENSGT00390000016919; -; .
HOVERGENHBG047955; -; .
OMAISDAMSW; -; .
OrthoDBEOG40K7Z4; -; .
PhylomeDBB4F772; -; .
GenevestigatorB4F772; -; .
GOGO:0005524; F:ATP binding; IEA:UniProtKB-KW; .
GOGO:0006950; P:response to stress; IEA:UniProtKB-KW; .
InterProIPR018181; Heat_shock_70_CS; .
InterProIPR001023; Hsp70; .
InterProIPR013126; Hsp_70; .
KOK09485; -; .
PANTHERPTHR19375; Hsp70; 1; .
PfamPF00012; HSP70; 1; .
PRINTSPR00301; HEATSHOCK70; .
PROSITEPS00329; HSP70_2; 1; .
PROSITEPS01036; HSP70_3; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server