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Searching in 'World-2DPAGE Repository [0030]' for entry matching: B5DEN5_RAT




World-2DPAGE Repository (0030):  B5DEN5_RAT


B5DEN5_RAT


General information about the entry
View entry in simple text format
Entry nameB5DEN5_RAT
Primary accession numberB5DEN5
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionSubName: Full=Eukaryotic translation elongation factor 1 beta 2; SubName: Full=RCG22471, isoform CRA_b; SubName: Full=Uncharacterized protein;.
Gene nameName=Eef1b2
ORFNames=rCG_22471
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000006;
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
RAT_INS1E_4-7
  map experimental info
 
RAT_INS1E_4-7

MAP LOCATIONS:
pI=4.43; Mw=34344  [identification data]
pI=4.33; Mw=31521  [identification data]

IDENTIFICATION: SPOT 1890: Mascot protein score=164. Number of peptides=5 [1]
SPOT 1994: Mascot protein score=162. Number of peptides=5 [1].
MAPPING (identification):
SPOT 1890: Tandem mass spectrometry [1];
SPOT 1994: Tandem mass spectrometry [1].

Copyright
Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
Cross-references
UniProtKB/TrEMBLB5DEN5; B5DEN5_RAT.
World-2DPAGE RepositoryB5DEN5; B5DEN5_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/TrEMBL
Extracted from UniProtKB/TrEMBL, release: 2011_11
Entry nameB5DEN5_RAT
Primary accession numberB5DEN5
Sequence was last modified on October 14, 2008 (version 1)
Annotations were last modified on November 16, 2011 (version 30)
Name and origin of the protein
DescriptionSubName: Full=Eukaryotic translation elongation factor 1 beta 2; SubName: Full=RCG22471, isoform CRA_b; SubName: Full=Uncharacterized protein;
Gene nameName=Eef1b2
ORFNames=rCG_22471
Encoded onName=Eef1b2; ORFNames=rCG_22471
KeywordsComplete proteome; Elongation factor; Protein biosynthesis; Reference proteome.
Cross-references
EMBLBC168738; AAI68738.1; -; mRNA
EMBLCH473965; EDL98899.1; -; Genomic_DNA
IPIIPI00476899; -; .
RefSeqNP_001102269.1; NM_001108799.2; .
UniGeneRn.3910; -; .
ProteinModelPortalB5DEN5; -; .
IntActB5DEN5; 1; .
MINTMINT-7138335; -; .
STRINGB5DEN5; -; .
PRIDEB5DEN5; -; .
EnsemblENSRNOT00000034740; ENSRNOP00000036882; ENSRNOG00000024186; .
GeneID363241; -; .
KEGGrno:363241; -; .
CTD1933; -; .
RGD1311415; Eef1b2; .
eggNOGroNOG07099; -; .
GeneTreeENSGT00390000011747; -; .
HOVERGENHBG000787; -; .
OMAFSRWFNH; -; .
OrthoDBEOG4Z8XXH; -; .
PhylomeDBB5DEN5; -; .
GenevestigatorB5DEN5; -; .
GOGO:0005853; C:eukaryotic translation elongation factor 1 complex; IEA:InterPro; .
GOGO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW; .
InterProIPR018940; EF-1_beta_acid_region_euk; .
InterProIPR010987; Glutathione-S-Trfase_C-like; .
InterProIPR014717; Transl_elong_EF1B/ribosomal_S6; .
InterProIPR001326; Transl_elong_EF1B_B/D_CS; .
InterProIPR014038; Transl_elong_fac_EF1B_bsu/dsu; .
Gene3DG3DSA:1.20.1050.10; GST_C_like; 1; .
Gene3DG3DSA:3.30.70.60; Transl_elong_EF1B/rib_con; 1; .
KOK03232; -; .
PfamPF10587; EF-1_beta_acid; 1; .
PfamPF00736; EF1_GNE; 1; .
SMARTSM00888; EF1_GNE; 1; .
SUPFAMSSF47616; GST_C_like; 1; .
SUPFAMSSF54984; Transl_elong_EF1B_B/D_G_exch; 1; .
PROSITEPS00824; EF1BD_1; 1; .
PROSITEPS00825; EF1BD_2; 1; .



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