resource logo

World-2DPAGE Repository

Attention: World-2DPAGE is no longer maintained. Previously submitted data can still be queried at World-2DPAGE Repository.

World-2DPAGE Repository 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 
Maps  [experimental info] 
[protein list] 
[graphical interface]
     Databases

use 'Ctrl' to select several
databases

Select Remote Interfaces
[All Interfaces]
SWISS-2DPAGE
World-2DPAGE Portal
Exclude local DBs
has only effect if a remote
interface is selected
     
Searching in 'World-2DPAGE Repository [0030]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0030):  B5DEY8_RAT

B5DEY8_RAT


General information about the entry
View entry in simple text format
Entry nameB5DEY8_RAT
Primary accession numberB5DEY8
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionSubName: Full=Sorting nexin 6; SubName: Full=Sorting nexin 6 (Predicted); SubName: Full=Uncharacterized protein;.
Gene nameName=Snx6
Synonyms=Snx6_predicted
ORFNames=rCG_62272
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000006;
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
RAT_INS1E_4-7
  map experimental info 		 
RAT_INS1E_4-7

MAP LOCATIONS:
pI=5.92; Mw=61064  [identification data]

IDENTIFICATION: SPOT 1051: Mascot protein score=64. Number of peptides=4 [1].
MAPPING (identification):
SPOT 1051: Tandem mass spectrometry [1].

Copyright
Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
Cross-references
UniProtKB/TrEMBLB5DEY8; B5DEY8_RAT.
World-2DPAGE RepositoryB5DEY8; B5DEY8_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/TrEMBL
Extracted from UniProtKB/TrEMBL, release: 2011_11
Entry nameB5DEY8_RAT
Primary accession numberB5DEY8
Sequence was last modified on October 14, 2008 (version 1)
Annotations were last modified on November 16, 2011 (version 25)
Name and origin of the protein
DescriptionSubName: Full=Sorting nexin 6; SubName: Full=Sorting nexin 6 (Predicted); SubName: Full=Uncharacterized protein;
Gene nameName=Snx6
Synonyms=Snx6_predicted
ORFNames=rCG_62272
Encoded onName=Snx6; Synonyms=Snx6_predicted; ORFNames=rCG_62272
KeywordsComplete proteome; Reference proteome.
Cross-references
EMBLBC168856; AAI68856.1; -; mRNA
EMBLCH473947; EDM03414.1; -; Genomic_DNA
IPIIPI00365613; -; .
RefSeqNP_001102181.1; NM_001108711.1; .
UniGeneRn.3602; -; .
STRINGB5DEY8; -; .
PRIDEB5DEY8; -; .
EnsemblENSRNOT00000007300; ENSRNOP00000007300; ENSRNOG00000005249; .
GeneID362738; -; .
KEGGrno:362738; -; .
CTD58533; -; .
RGD1304647; Snx6; .
eggNOGroNOG05795; -; .
GeneTreeENSGT00550000074512; -; .
HOVERGENHBG000716; -; .
OrthoDBEOG42821S; -; .
PhylomeDBB5DEY8; -; .
GenevestigatorB5DEY8; -; .
GOGO:0035091; F:phosphatidylinositol binding; IEA:InterPro; .
GOGO:0007154; P:cell communication; IEA:InterPro; .
InterProIPR001683; Phox; .
InterProIPR014637; Snx5_Snx6; .
InterProIPR015404; Vps5_C; .
Gene3DG3DSA:3.30.1520.10; PX; 1; .
PfamPF00787; PX; 1; .
PfamPF09325; Vps5; 1; .
PIRSFPIRSF036924; Snx5_Snx6; 1; .
SUPFAMSSF64268; PX; 1; .
PROSITEPS50195; PX; 1; .





Searching in 'World-2DPAGE Repository [0001]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0001):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0001)



Searching in 'World-2DPAGE Repository [0002]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0002):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0002)



Searching in 'World-2DPAGE Repository [0003]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0003):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0003)



Searching in 'World-2DPAGE Repository [0004]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0004):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0004)



Searching in 'World-2DPAGE Repository [0005]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0005):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0005)



Searching in 'World-2DPAGE Repository [0006]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0006):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0006)



Searching in 'World-2DPAGE Repository [0007]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0007):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0007)



Searching in 'World-2DPAGE Repository [0008]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0008):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0008)



Searching in 'World-2DPAGE Repository [0009]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0009):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0009)



Searching in 'World-2DPAGE Repository [0010]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0010):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0010)



Searching in 'World-2DPAGE Repository [0011]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0011):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0011)



Searching in 'World-2DPAGE Repository [0012]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0012):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0012)



Searching in 'World-2DPAGE Repository [0014]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0014):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0014)



Searching in 'World-2DPAGE Repository [0017]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0017):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0017)



Searching in 'World-2DPAGE Repository [0018]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0018):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0018)



Searching in 'World-2DPAGE Repository [0019]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0019):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0019)



Searching in 'World-2DPAGE Repository [0020]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0020):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0020)



Searching in 'World-2DPAGE Repository [0021]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0021):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0021)



Searching in 'World-2DPAGE Repository [0022]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0022):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0022)



Searching in 'World-2DPAGE Repository [0023]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0023):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0023)



Searching in 'World-2DPAGE Repository [0024]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0024):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0024)



Searching in 'World-2DPAGE Repository [0026]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0026):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0026)



Searching in 'World-2DPAGE Repository [0027]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0027):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0027)



Searching in 'World-2DPAGE Repository [0029]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0029):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0029)



Searching in 'World-2DPAGE Repository [0031]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0031):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0031)



Searching in 'World-2DPAGE Repository [0032]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0032):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0032)



Searching in 'World-2DPAGE Repository [0034]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0034):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0034)



Searching in 'World-2DPAGE Repository [0035]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0035):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0035)



Searching in 'World-2DPAGE Repository [0036]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0036):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0036)



Searching in 'World-2DPAGE Repository [0037]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0037):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0037)



Searching in 'World-2DPAGE Repository [0038]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0038):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0038)



Searching in 'World-2DPAGE Repository [0039]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0039):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0039)



Searching in 'World-2DPAGE Repository [0040]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0040):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0040)



Searching in 'World-2DPAGE Repository [0042]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0042):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0042)



Searching in 'World-2DPAGE Repository [0043]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0043):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0043)



Searching in 'World-2DPAGE Repository [0044]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0044):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0044)



Searching in 'World-2DPAGE Repository [0046]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0046):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0046)



Searching in 'World-2DPAGE Repository [0047]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0047):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0047)



Searching in 'World-2DPAGE Repository [0050]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0050):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0050)



Searching in 'World-2DPAGE Repository [0051]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0051):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0051)



Searching in 'World-2DPAGE Repository [0053]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0053):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0053)



Searching in 'World-2DPAGE Repository [0054]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0054):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0054)



Searching in 'World-2DPAGE Repository [0056]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0056):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0056)



Searching in 'World-2DPAGE Repository [0059]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0059):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0059)



Searching in 'World-2DPAGE Repository [0061]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0061):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0061)



Searching in 'World-2DPAGE Repository [0062]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0062):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0062)



Searching in 'World-2DPAGE Repository [0063]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0063):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0063)



Searching in 'World-2DPAGE Repository [0066]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0066):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0066)



Searching in 'World-2DPAGE Repository [0068]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0068):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0068)



Searching in 'World-2DPAGE Repository [0069]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0069):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0069)



Searching in 'World-2DPAGE Repository [0076]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0076):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0076)



Searching in 'World-2DPAGE Repository [0077]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0077):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0077)



Searching in 'World-2DPAGE Repository [0080]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0080):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0080)



Searching in 'World-2DPAGE Repository [0084]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0084):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0084)



Searching in 'World-2DPAGE Repository [0085]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0085):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0085)



Searching in 'World-2DPAGE Repository [0088]' for entry matching: B5DEY8_RAT




World-2DPAGE Repository (0088):  B5DEY8_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0088)



World-2DPAGE Repository image

World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server