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Searching in 'World-2DPAGE Repository [0004]' for entry matching: CALR_RAT




World-2DPAGE Repository (0004):  CALR_RAT

CALR_RAT


General information about the entry
View entry in simple text format
Entry nameCALR_RAT
Primary accession numberP18418
integrated into World-2DPAGE Repository (0004) on October 13, 2008 (release 1)
2D Annotations were last modified onMay 18, 2011 (version 2)
General Annotations were last modified on December 22, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Calreticulin; AltName: Full=CALBP; AltName: Full=CRP55; AltName: Full=Calcium-binding protein 3; Short=CABP3; AltName: Full=Calregulin; AltName: Full=Endoplasmic reticulum resident protein 60; Short=ERp60; AltName: Full=HACBP; Flags: Precursor;.
Gene nameName=Calr
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   MAPPING ON GEL
PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
OB21DSUB
  map experimental info 		 
OB21DSUB

MAP LOCATIONS:
pI=4.37; Mw=51000  [identification data]

MAPPING (identification):
SPOT 341: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
UniProtKB/Swiss-ProtP18418; CALR_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameCALR_RAT
Primary accession numberP18418
Secondary accession number(s) P10452
Sequence was last modified on November 1, 1990 (version 1)
Annotations were last modified on November 16, 2011 (version 124)
Name and origin of the protein
DescriptionRecName: Full=Calreticulin; AltName: Full=CALBP; AltName: Full=CRP55; AltName: Full=Calcium-binding protein 3; Short=CABP3; AltName: Full=Calregulin; AltName: Full=Endoplasmic reticulum resident protein 60; Short=ERp60; AltName: Full=HACBP; Flags: Precursor;
Gene nameName=Calr
Encoded onName=Calr
Keywords3D-structure; Acetylation; Calcium; Chaperone; Complete proteome; Direct protein sequencing; Disulfide bond; Endoplasmic reticulum; Lectin; Metal-binding; Reference proteome; Repeat; Signal; Zinc.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLX53363; CAA37446.1; -; mRNA
EMBLD78308; BAA11345.1; -; mRNA
EMBLX79327; CAA55890.1; -; mRNA
EMBLBC062395; AAH62395.1; -; mRNA
EMBLX13702; CAA31987.1; -; mRNA
IPIIPI00191728; -; .
PIRJH0819; JH0819; .
RefSeqNP_071794.1; NM_022399.2; .
UniGeneRn.974; -; .
PDB1HHN; NMR; -; A=206-305
PDB1K91; NMR; -; A=238-273
PDB1K9C; NMR; -; A=206-278
PDBsum1HHN; -; .
PDBsum1K91; -; .
PDBsum1K9C; -; .
ProteinModelPortalP18418; -; .
SMRP18418; 206-305; .
IntActP18418; 2; .
STRINGP18418; -; .
World-2DPAGE0004:P18418; -; .
PRIDEP18418; -; .
EnsemblENSRNOT00000004091; ENSRNOP00000004091; ENSRNOG00000003029; .
GeneID64202; -; .
KEGGrno:64202; -; .
UCSCNM_022399; rat; .
CTD811; -; .
RGD620288; Calr; .
eggNOGroNOG10495; -; .
GeneTreeENSGT00430000030841; -; .
HOVERGENHBG005407; -; .
InParanoidP18418; -; .
OMAWINSESK; -; .
OrthoDBEOG41JZCD; -; .
PhylomeDBP18418; -; .
NextBio612898; -; .
ArrayExpressP18418; -; .
GenevestigatorP18418; -; .
GermOnlineENSRNOG00000003029; Rattus norvegicus; .
GOGO:0001669; C:acrosomal vesicle; IDA:RGD; .
GOGO:0005788; C:endoplasmic reticulum lumen; IEA:UniProtKB-SubCell; .
GOGO:0031012; C:extracellular matrix; IDA:RGD; .
GOGO:0005615; C:extracellular space; IDA:RGD; .
GOGO:0005794; C:Golgi apparatus; IDA:RGD; .
GOGO:0005792; C:microsome; IDA:RGD; .
GOGO:0005634; C:nucleus; IDA:RGD; .
GOGO:0048471; C:perinuclear region of cytoplasm; IDA:RGD; .
GOGO:0016529; C:sarcoplasmic reticulum; IDA:RGD; .
GOGO:0005625; C:soluble fraction; IDA:RGD; .
GOGO:0005509; F:calcium ion binding; IDA:RGD; .
GOGO:0042562; F:hormone binding; IPI:RGD; .
GOGO:0005506; F:iron ion binding; IDA:RGD; .
GOGO:0003729; F:mRNA binding; IDA:BHF-UCL; .
GOGO:0042277; F:peptide binding; IDA:RGD; .
GOGO:0005529; F:sugar binding; IEA:UniProtKB-KW; .
GOGO:0051082; F:unfolded protein binding; IEA:InterPro; .
GOGO:0055007; P:cardiac muscle cell differentiation; IEP:RGD; .
GOGO:0071285; P:cellular response to lithium ion; IEP:RGD; .
GOGO:0071310; P:cellular response to organic substance; IEP:RGD; .
GOGO:0017148; P:negative regulation of translation; IDA:BHF-UCL; .
GOGO:0006457; P:protein folding; TAS:RGD; .
GOGO:0050821; P:protein stabilization; ISS:UniProtKB; .
GOGO:0042493; P:response to drug; IEP:RGD; .
GOGO:0032355; P:response to estradiol stimulus; IEP:RGD; .
GOGO:0033574; P:response to testosterone stimulus; IEP:RGD; .
GOGO:0007283; P:spermatogenesis; IEP:RGD; .
InterProIPR001580; Calret/calnex; .
InterProIPR018124; Calret/calnex_CS; .
InterProIPR009169; Calreticulin; .
InterProIPR008985; ConA-like_lec_gl; .
InterProIPR013320; ConA-like_subgrp; .
Gene3DG3DSA:2.60.120.200; ConA_like_subgrp; 2; .
KOK08057; -; .
PANTHERPTHR11073; Calret/calnex; 1; .
PfamPF00262; Calreticulin; 1; .
PIRSFPIRSF002356; Calreticulin; 1; .
PRINTSPR00626; CALRETICULIN; .
SUPFAMSSF49899; ConA_like_lec_gl; 2; .
PROSITEPS00803; CALRETICULIN_1; 1; .
PROSITEPS00804; CALRETICULIN_2; 1; .
PROSITEPS00805; CALRETICULIN_REPEAT; 3; .
PROSITEPS00014; ER_TARGET; 1; .


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World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server