World-2DPAGE Home
Home  |  Contact
Due to maintenance work, this service and will be unavailable from Tuesday August 23rd 18:00 until Wednesday August 24th 08:00 CEST. Apologies for the inconvenience.

World-2DPAGE Repository 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] 
[graphical interface]


use 'Ctrl' to select several

Select Remote Interfaces
[All Interfaces]
World-2DPAGE Portal

Exclude local DBs
has only effect if a remote
interface is selected
Searching in 'World-2DPAGE Repository [0019]' for entry matching: COR1A_RAT

World-2DPAGE Repository (0019):  COR1A_RAT


General information about the entry
View entry in simple text format
Entry nameCOR1A_RAT
Primary accession numberQ91ZN1
integrated into World-2DPAGE Repository (0019) on December 9, 2009 (release 1)
2D Annotations were last modified onMay 30, 2011 (version 2)
General Annotations were last modified on January 13, 2012 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Coronin-1A; AltName: Full=Coronin-like protein A; Short=Clipin-A; AltName: Full=Tryptophan aspartate-containing coat protein; Short=TACO;.
Gene nameName=Coro1a
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
VanGuilder H.D., Yan H., Farley J.A., Sonntag W.E., Freeman W.M.
''Aging alters the expression of neurotransmission-regulating proteins in the hippocampal synaptoproteome''
J of Neurochemistry 113(6):1577-1588 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

HIPP_SYNAP {Rat hippocampal synaptoproteome}
Rattus norvegicus (Rat)
Tissue: Hippocampus
  map experimental info

pI=6.05; Mw=51717  [identification data]

IDENTIFICATION: SPOT 402: Peptides number=3. SeqCov=12.4%. MOWSE score=1.97E+3 [1].
MAPPING (identification):
SPOT 402: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Data from Dr. Willard Freeman, Penn State College of Medicine, USA
UniProtKB/Swiss-ProtQ91ZN1; COR1A_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameCOR1A_RAT
Primary accession numberQ91ZN1
Sequence was last modified on January 23, 2007 (version 3)
Annotations were last modified on November 16, 2011 (version 73)
Name and origin of the protein
DescriptionRecName: Full=Coronin-1A; AltName: Full=Coronin-like protein A; Short=Clipin-A; AltName: Full=Tryptophan aspartate-containing coat protein; Short=TACO;
Gene nameName=Coro1a
Encoded onName=Coro1a; Synonyms=Coro1
KeywordsAcetylation; Actin-binding; Coiled coil; Complete proteome; Cytoplasm; Cytoplasmic vesicle; Cytoskeleton; Direct protein sequencing; Membrane; Phosphoprotein; Reference proteome; Repeat; WD repeat.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLAF416730; AAL18695.1; -; mRNA
EMBLAF495469; AAM18515.1; -; mRNA
EMBLBC086971; AAH86971.1; -; mRNA
IPIIPI00210071; -; .
RefSeqNP_569095.1; NM_130411.2; .
UniGeneRn.6990; -; .
HSSPO89053; 2AKF; .
ProteinModelPortalQ91ZN1; -; .
SMRQ91ZN1; 9-394; 430-461; .
STRINGQ91ZN1; -; .
World-2DPAGE0004:Q91ZN1; -; .
PRIDEQ91ZN1; -; .
EnsemblENSRNOT00000026496; ENSRNOP00000026496; ENSRNOG00000019430; .
GeneID155151; -; .
KEGGrno:155151; -; .
UCSCNM_130411; rat; .
CTD11151; -; .
RGD620009; Coro1a; .
eggNOGmaNOG12806; -; .
GeneTreeENSGT00550000074317; -; .
HOVERGENHBG059978; -; .
InParanoidQ91ZN1; -; .
OrthoDBEOG4RNB8C; -; .
PhylomeDBQ91ZN1; -; .
NextBio620883; -; .
ArrayExpressQ91ZN1; -; .
GenevestigatorQ91ZN1; -; .
GOGO:0030864; C:cortical actin cytoskeleton; IBA:RefGenome; .
GOGO:0030027; C:lamellipodium; IBA:RefGenome; .
GOGO:0001891; C:phagocytic cup; IBA:RefGenome; .
GOGO:0030670; C:phagocytic vesicle membrane; IEA:UniProtKB-SubCell; .
GOGO:0051015; F:actin filament binding; IBA:RefGenome; .
GOGO:0030595; P:leukocyte chemotaxis; IBA:RefGenome; .
GOGO:0051126; P:negative regulation of actin nucleation; IBA:RefGenome; .
GOGO:0001845; P:phagolysosome assembly; IBA:RefGenome; .
GOGO:0050918; P:positive chemotaxis; IBA:RefGenome; .
GOGO:0008360; P:regulation of cell shape; IBA:RefGenome; .
GOGO:0030217; P:T cell differentiation; NAS:RGD; .
GOGO:0032796; P:uropod organization; IBA:RefGenome; .
InterProIPR015505; Coronin; .
InterProIPR015048; DUF1899; .
InterProIPR015049; DUF1900; .
InterProIPR015943; WD40/YVTN_repeat-like_dom; .
InterProIPR001680; WD40_repeat; .
InterProIPR019782; WD40_repeat_2; .
InterProIPR019775; WD40_repeat_CS; .
InterProIPR017986; WD40_repeat_dom; .
InterProIPR019781; WD40_repeat_subgr; .
Gene3DG3DSA:; WD40/YVTN_repeat-like; 1; .
KOK13882; -; .
PANTHERPTHR10856; Coronin; 1; .
PfamPF08953; DUF1899; 1; .
PfamPF08954; DUF1900; 1; .
PfamPF00400; WD40; 3; .
SMARTSM00320; WD40; 3; .

World-2DPAGE Repository image

World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server