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World-2DPAGE Repository
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Searching in 'World-2DPAGE Repository [0014]' for entry
matching:
COTL1_RAT
World-2DPAGE Repository
(0014):
COTL1_RAT
COTL1_RAT
General information about the entry
View entry in simple text format
Entry name
COTL1_RAT
Primary accession number
B0BNA5
integrated into World-2DPAGE Repository (0014) on
October 13, 2008 (release 1)
2D Annotations were last modified on
June 1, 2011 (version 3)
General Annotations were last modified on
November 25, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Coactosin-like protein;.
Gene name
Name=Cotl1
Synonyms=Clp
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.200900680
;
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein
RAT_CEREBELLUM_21D
{Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
map experimental info
RAT_CEREBELLUM_21D
MAP LOCATIONS:
SPOT 3299
:
pI=5.13; Mw=15000
[identification data]
IDENTIFICATION:
SPOT 3299: SeqCov=78%. MascotPMF=141 [
1
].
MAPPING (identification):
SPOT
3299
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
PRIDE
10017.
UniProtKB/Swiss-Prot
B0BNA5; COTL1_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
COTL1_RAT
Primary accession number
B0BNA5
Sequence was last modified on
February 26, 2008 (version 1)
Annotations were last modified on
September 21, 2011 (version 32)
Name and origin of the protein
Description
RecName: Full=Coactosin-like protein;
Gene name
Name=Cotl1
Synonyms=Clp
Encoded on
Name=Cotl1; Synonyms=Clp
Keywords
Acetylation
;
Actin-binding
;
Complete proteome
;
Cytoplasm
;
Cytoskeleton
;
Phosphoprotein
;
Reference proteome
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
CH473972; EDL92684.1
; -; Genomic_DNA
EMBL
CH473972; EDL92686.1
; -; Genomic_DNA
EMBL
BC158746; AAI58747.1
; -; mRNA
IPI
IPI00869481; -
; .
RefSeq
NP_001101922.1; NM_001108452.1
; .
UniGene
Rn.98506; -
; .
ProteinModelPortal
B0BNA5; -
; .
SMR
B0BNA5; 1-142
; .
STRING
B0BNA5; -
; .
PRIDE
B0BNA5; -
; .
Ensembl
ENSRNOT00000021954; ENSRNOP00000021954
; ENSRNOG00000016257; .
GeneID
361422; -
; .
KEGG
rno:361422; -
; .
CTD
23406; -
; .
RGD
1305498; Cotl1
; .
eggNOG
roNOG17588; -
; .
GeneTree
ENSGT00390000012498; -
; .
HOVERGEN
HBG051082; -
; .
OMA
CTDDVRL; -
; .
OrthoDB
EOG4W0XFD; -
; .
PhylomeDB
B0BNA5; -
; .
NextBio
676248; -
; .
Genevestigator
B0BNA5; -
; .
GO
GO:0005737; C:cytoplasm
; IEA:UniProtKB-KW; .
GO
GO:0005856; C:cytoskeleton
; IEA:UniProtKB-SubCell; .
GO
GO:0003779; F:actin binding
; IEA:UniProtKB-KW; .
InterPro
IPR002108; Actin-bd_cofilin/tropomyosin
; .
Pfam
PF00241; Cofilin_ADF
; 1; .
SMART
SM00102; ADF
; 1; .
PROSITE
PS51263; ADF_H
; 1; .
World-2DPAGE Repository (search AC)
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ver. 3.10.2
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