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World-2DPAGE Repository
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Searching in 'World-2DPAGE Repository [0014]' for entry
matching:
CX6A1_RAT
World-2DPAGE Repository
(0014):
CX6A1_RAT
CX6A1_RAT
General information about the entry
View entry in simple text format
Entry name
CX6A1_RAT
Primary accession number
P10818
integrated into World-2DPAGE Repository (0014) on
October 13, 2008 (release 1)
2D Annotations were last modified on
June 1, 2011 (version 3)
General Annotations were last modified on
November 25, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Cytochrome c oxidase subunit 6A1, mitochondrial; AltName: Full=Cytochrome c oxidase polypeptide VIa-liver; Flags: Precursor;.
Gene name
Name=Cox6a1
Synonyms=Cox6al
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.200900680
;
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein
RAT_CEREBELLUM_21D
{Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
map experimental info
RAT_CEREBELLUM_21D
MAP LOCATIONS:
SPOT 3326
:
pI=6.39; Mw=9000
[identification data]
IDENTIFICATION:
SPOT 3326: SeqCov=94%. MascotPMF=61 [
1
].
MAPPING (identification):
SPOT
3326
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
PRIDE
10017.
UniProtKB/Swiss-Prot
P10818; CX6A1_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
CX6A1_RAT
Primary accession number
P10818
Sequence was last modified on
February 1, 1996 (version 2)
Annotations were last modified on
November 16, 2011 (version 94)
Name and origin of the protein
Description
RecName: Full=Cytochrome c oxidase subunit 6A1, mitochondrial; AltName: Full=Cytochrome c oxidase polypeptide VIa-liver; Flags: Precursor;
Gene name
Name=Cox6a1
Synonyms=Cox6al
Encoded on
Name=Cox6a1; Synonyms=Cox6al
Keywords
Complete proteome
;
Direct protein sequencing
;
Membrane
;
Mitochondrion
;
Mitochondrion inner membrane
;
Reference proteome
;
Transit peptide
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
X72757; CAA51286.1
; ALT_SEQ; Genomic_DNA
EMBL
X12553; CAA31067.1
; -; mRNA
IPI
IPI00194042; -
; .
PIR
S01156; S01156
; .
PIR
S65379; S65379
; .
RefSeq
NP_036946.1; NM_012814.1
; .
UniGene
Rn.880; -
; .
ProteinModelPortal
P10818; -
; .
SMR
P10818; 27-109
; .
STRING
P10818; -
; .
PRIDE
P10818; -
; .
Ensembl
ENSRNOT00000001545; ENSRNOP00000001545
; ENSRNOG00000001170; .
GeneID
25282; -
; .
KEGG
rno:25282; -
; .
NMPDR
fig|10116.3.peg.8719; -
; .
UCSC
NM_012814; rat
; .
CTD
1337; -
; .
RGD
2384; Cox6a1
; .
eggNOG
roNOG17101; -
; .
GeneTree
ENSGT00390000002756; -
; .
HOVERGEN
HBG060482; -
; .
InParanoid
P10818; -
; .
OMA
NAYLKHQ; -
; .
OrthoDB
EOG4N04GG; -
; .
PhylomeDB
P10818; -
; .
NextBio
606005; -
; .
ArrayExpress
P10818; -
; .
Genevestigator
P10818; -
; .
GermOnline
ENSRNOG00000001170; Rattus norvegicus
; .
GO
GO:0005751; C:mitochondrial respiratory chain complex IV
; IEA:InterPro; .
GO
GO:0004129; F:cytochrome-c oxidase activity
; IEA:InterPro; .
InterPro
IPR001349; Cyt_c_oxidase_su6a
; .
InterPro
IPR018507; Cyt_c_oxidase_su6a_CS
; .
Gene3D
G3DSA:4.10.95.10; COX6A
; 1; .
KO
K02266; -
; .
PANTHER
PTHR11504; COX6A
; 1; .
Pfam
PF02046; COX6A
; 1; .
PIRSF
PIRSF000277; COX6A1
; 1; .
ProDom
PD006036; Cyt_c_oxidase_su6a
; 1; .
SUPFAM
SSF81411; COX6A
; 1; .
PROSITE
PS01329; COX6A
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
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