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Searching in 'World-2DPAGE Repository [0004]' for entry matching: DHE3_RAT

World-2DPAGE Repository (0004):  DHE3_RAT


General information about the entry
View entry in simple text format
Entry nameDHE3_RAT
Primary accession numberP10860
integrated into World-2DPAGE Repository (0004) on October 13, 2008 (release 1)
2D Annotations were last modified onMay 18, 2011 (version 2)
General Annotations were last modified on December 22, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Glutamate dehydrogenase 1, mitochondrial; Short=GDH 1; EC=; AltName: Full=Memory-related gene 2 protein; Short=MRG-2; Flags: Precursor;.
Gene nameName=Glud1
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
  map experimental info

pI=6.40; Mw=52000  [identification data]
pI=6.64; Mw=51000  [identification data]
pI=6.85; Mw=50000  [identification data]

MAPPING (identification):
SPOT 312: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 319: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 342: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
UniProtKB/Swiss-ProtP10860; DHE3_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameDHE3_RAT
Primary accession numberP10860
Secondary accession number(s) Q66HI8 Q6LC16
Sequence was last modified on April 4, 2006 (version 2)
Annotations were last modified on December 14, 2011 (version 114)
Name and origin of the protein
DescriptionRecName: Full=Glutamate dehydrogenase 1, mitochondrial; Short=GDH 1; EC=; AltName: Full=Memory-related gene 2 protein; Short=MRG-2; Flags: Precursor;
Gene nameName=Glud1
Encoded onName=Glud1; Synonyms=Glud
KeywordsAcetylation; ADP-ribosylation; ATP-binding; Complete proteome; Direct protein sequencing; GTP-binding; Mitochondrion; NADP; Nucleotide-binding; Oxidoreductase; Phosphoprotein; Reference proteome; Transit peptide.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLX14223; CAA32441.1; -; mRNA
EMBLX14044; CAA32202.1; -; mRNA
EMBLBC081841; AAH81841.1; -; mRNA
EMBLX64365; CAA45717.1; -; Genomic_DNA
EMBLU95148; AAB70012.1; -; mRNA
IPIIPI00324633; -; .
PIRS03707; S03707; .
RefSeqNP_036702.1; NM_012570.1; .
UniGeneRn.55106; -; .
ProteinModelPortalP10860; -; .
SMRP10860; 63-558; .
IntActP10860; 2; .
MINTMINT-2793533; -; .
STRINGP10860; -; .
PhosphoSiteP10860; -; .
World-2DPAGE0004:P10860; -; .
PRIDEP10860; -; .
EnsemblENSRNOT00000013788; ENSRNOP00000013789; ENSRNOG00000010222; .
GeneID24399; -; .
KEGGrno:24399; -; .
NMPDRfig|10116.3.peg.12078; -; .
UCSCNM_012570; rat; .
CTD2746; -; .
RGD2708; Glud1; .
eggNOGroNOG05123; -; .
HOVERGENHBG005479; -; .
InParanoidP10860; -; .
OrthoDBEOG4H72B7; -; .
PhylomeDBP10860; -; .
NextBio603195; -; .
ArrayExpressP10860; -; .
GenevestigatorP10860; -; .
GermOnlineENSRNOG00000010222; Rattus norvegicus; .
GOGO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell; .
GOGO:0005524; F:ATP binding; IEA:UniProtKB-KW; .
GOGO:0019899; F:enzyme binding; IPI:RGD; .
GOGO:0004352; F:glutamate dehydrogenase (NAD+) activity; IDA:RGD; .
GOGO:0004353; F:glutamate dehydrogenase [NAD(P)+] activity; IEA:EC; .
GOGO:0005525; F:GTP binding; IEA:UniProtKB-KW; .
GOGO:0006538; P:glutamate catabolic process; TAS:RGD; .
GOGO:0007616; P:long-term memory; IEP:RGD; .
InterProIPR006095; Glu/Leu/Phe/Val_DH; .
InterProIPR006096; Glu/Leu/Phe/Val_DH_C; .
InterProIPR006097; Glu/Leu/Phe/Val_DH_dimer_dom; .
InterProIPR016040; NAD(P)-bd_dom; .
Gene3DG3DSA:; NAD(P)-bd; 1; .
KOK00261; -; .
PfamPF00208; ELFV_dehydrog; 1; .
PfamPF02812; ELFV_dehydrog_N; 1; .
SMARTSM00839; ELFV_dehydrog; 1; .

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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server