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World-2DPAGE Repository
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Select Remote Interfaces
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SWISS-2DPAGE
World-2DPAGE Portal
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Searching in 'World-2DPAGE Repository [0022]' for entry
matching:
ECH1_RAT
World-2DPAGE Repository
(0022):
ECH1_RAT
ECH1_RAT
General information about the entry
View entry in simple text format
Entry name
ECH1_RAT
Primary accession number
Q62651
integrated into World-2DPAGE Repository (0022) on
May 7, 2010 (release 1)
2D Annotations were last modified on
June 22, 2011 (version 2)
General Annotations were last modified on
November 24, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial; EC=5.3.3.-; Flags: Precursor;.
Gene name
Name=Ech1
Annotated species
Rattus [TaxID:
10114
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.201000593
;
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)
2D PAGE maps for identified proteins
How to interpret a protein
HCR_LCR_HEART
{HCR LCR Cardiac Map}
Rattus
Tissue: Heart
map experimental info
HCR_LCR_HEART
MAP LOCATIONS:
SPOT 76
:
pI=8.13; Mw=36491
[identification data]
IDENTIFICATION:
SPOT 76: SeqCov=49.5%. Peptides MS=13/20. Mascot PMF Score=128 [
1
].
MAPPING (identification):
SPOT
76
:
Peptide mass fingerprinting
[
1
].
Copyright
Data from Dr. Jatin Burniston, Liverpool John Moores University, UK
Cross-references
UniProtKB/Swiss-Prot
Q62651; ECH1_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
ECH1_RAT
Primary accession number
Q62651
Sequence was last modified on
July 15, 1999 (version 2)
Annotations were last modified on
November 16, 2011 (version 96)
Name and origin of the protein
Description
RecName: Full=Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial; EC=5.3.3.-; Flags: Precursor;
Gene name
Name=Ech1
Encoded on
Name=Ech1
Keywords
3D-structure
;
Acetylation
;
Complete proteome
;
Direct protein sequencing
;
Fatty acid metabolism
;
Isomerase
;
Lipid metabolism
;
Metal-binding
;
Mitochondrion
;
Peroxisome
;
Phosphoprotein
;
Reference proteome
;
Transit peptide
;
Zinc
;
Zinc-finger
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
U08976; AAA82008.1
; -; mRNA
EMBL
BC062226; AAH62226.1
; -; mRNA
IPI
IPI00326561; -
; .
PIR
A57626; A57626
; .
RefSeq
NP_072116.1; NM_022594.1
; .
UniGene
Rn.6148; -
; .
PDB
1DCI; X-ray
; 1.50 A; A/B/C=54-327
PDBsum
1DCI; -
; .
ProteinModelPortal
Q62651; -
; .
SMR
Q62651; 54-327
; .
MINT
MINT-4597589; -
; .
STRING
Q62651; -
; .
Rat-heart-2DPAGE
Q62651; -
; .
PRIDE
Q62651; -
; .
Ensembl
ENSRNOT00000027537; ENSRNOP00000027537
; ENSRNOG00000020308; .
GeneID
64526; -
; .
KEGG
rno:64526; -
; .
UCSC
BC060565; rat
; .
CTD
1891; -
; .
RGD
69353; Ech1
; .
eggNOG
roNOG16501; -
; .
GeneTree
ENSGT00580000081296; -
; .
HOVERGEN
HBG005556; -
; .
InParanoid
Q62651; -
; .
OMA
HTNQEGL; -
; .
OrthoDB
EOG4VQ9PW; -
; .
PhylomeDB
Q62651; -
; .
NextBio
613350; -
; .
ArrayExpress
Q62651; -
; .
Genevestigator
Q62651; -
; .
GermOnline
ENSRNOG00000020308; Rattus norvegicus
; .
GO
GO:0005739; C:mitochondrion
; IDA:UniProtKB; .
GO
GO:0005777; C:peroxisome
; IEA:UniProtKB-SubCell; .
GO
GO:0016853; F:isomerase activity
; IEA:UniProtKB-KW; .
GO
GO:0046872; F:metal ion binding
; IEA:UniProtKB-KW; .
GO
GO:0006631; P:fatty acid metabolic process
; IEA:UniProtKB-KW; .
InterPro
IPR001753; Crotonase_core
; .
InterPro
IPR018376; Enoyl-CoA_hyd/isom_CS
; .
KO
K12663; -
; .
Pfam
PF00378; ECH
; 1; .
PROSITE
PS00166; ENOYL_COA_HYDRATASE
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
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