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Searching in 'World-2DPAGE Repository [0019]' for entry matching: EF1A1_RAT

World-2DPAGE Repository (0019):  EF1A1_RAT


General information about the entry
View entry in simple text format
Entry nameEF1A1_RAT
Primary accession numberP62630
integrated into World-2DPAGE Repository (0019) on December 9, 2009 (release 1)
2D Annotations were last modified onMay 30, 2011 (version 2)
General Annotations were last modified on January 13, 2012 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Elongation factor 1-alpha 1; Short=EF-1-alpha-1; AltName: Full=Elongation factor Tu; Short=EF-Tu; AltName: Full=Eukaryotic elongation factor 1 A-1; Short=eEF1A-1;.
Gene nameName=Eef1a1
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
VanGuilder H.D., Yan H., Farley J.A., Sonntag W.E., Freeman W.M.
''Aging alters the expression of neurotransmission-regulating proteins in the hippocampal synaptoproteome''
J of Neurochemistry 113(6):1577-1588 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

HIPP_SYNAP {Rat hippocampal synaptoproteome}
Rattus norvegicus (Rat)
Tissue: Hippocampus
  map experimental info

pI=9.10; Mw=50460  [identification data]

IDENTIFICATION: SPOT 1169: Peptides number=5. SeqCov=10.8%. MOWSE score=6.00E+4 [1].
MAPPING (identification):
SPOT 1169: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Data from Dr. Willard Freeman, Penn State College of Medicine, USA
UniProtKB/Swiss-ProtP62630; EF1A1_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameEF1A1_RAT
Primary accession numberP62630
Secondary accession number(s) P20001 Q5BJW8 Q64718 Q78ED4
Sequence was last modified on July 19, 2004 (version 1)
Annotations were last modified on November 16, 2011 (version 73)
Name and origin of the protein
DescriptionRecName: Full=Elongation factor 1-alpha 1; Short=EF-1-alpha-1; AltName: Full=Elongation factor Tu; Short=EF-Tu; AltName: Full=Eukaryotic elongation factor 1 A-1; Short=eEF1A-1;
Gene nameName=Eef1a1
Encoded onName=Eef1a1; Synonyms=Eef1a
KeywordsAcetylation; Complete proteome; Cytoplasm; Elongation factor; GTP-binding; Methylation; Nucleotide-binding; Nucleus; Phosphoprotein; Protein biosynthesis; Reference proteome; Ubl conjugation.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLX63561; CAA45122.1; -; mRNA
EMBLX61043; CAA43378.1; -; mRNA
EMBLL10339; AAA91895.1; -; mRNA
EMBLBC063162; AAH63162.1; -; mRNA
EMBLBC072542; AAH72542.1; -; mRNA
EMBLBC091297; AAH91297.1; -; mRNA
EMBLBC111707; AAI11708.1; -; mRNA
EMBLBC128723; AAI28724.1; -; mRNA
EMBLM81088; AAA41105.1; -; mRNA
IPIIPI00195372; -; .
PIRS21055; S21055; .
RefSeqNP_787032.1; NM_175838.1; .
UniGeneRn.144660; -; .
UniGeneRn.965; -; .
ProteinModelPortalP62630; -; .
SMRP62630; 2-443; .
IntActP62630; 3; .
MINTMINT-87282; -; .
STRINGP62630; -; .
PhosphoSiteP62630; -; .
World-2DPAGE0004:P62630; -; .
PRIDEP62630; -; .
EnsemblENSRNOT00000013608; ENSRNOP00000013608; ENSRNOG00000009439; .
GeneID171361; -; .
KEGGrno:171361; -; .
NMPDRfig|10116.3.peg.28972; -; .
UCSCNM_175838; rat; .
CTD1915; -; .
RGD67387; Eef1a1; .
eggNOGmaNOG14917; -; .
GeneTreeENSGT00570000078778; -; .
HOVERGENHBG000179; -; .
InParanoidP62630; -; .
OrthoDBEOG40K7ZP; -; .
PhylomeDBP62630; -; .
NextBio622156; -; .
GenevestigatorP62630; -; .
GermOnlineENSRNOG00000009439; Rattus norvegicus; .
GOGO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell; .
GOGO:0005634; C:nucleus; IDA:RGD; .
GOGO:0005525; F:GTP binding; IEA:UniProtKB-KW; .
GOGO:0003924; F:GTPase activity; IEA:InterPro; .
GOGO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW; .
InterProIPR000795; ProtSyn_GTP-bd; .
InterProIPR009001; Transl_elong_EF1A/Init_IF2_C; .
InterProIPR004539; Transl_elong_EF1A_euk/arc; .
InterProIPR004161; Transl_elong_EFTu/EF1A_2; .
InterProIPR004160; Transl_elong_EFTu/EF1A_C; .
InterProIPR009000; Transl_elong_init/rib_B-barrel; .
KOK03231; -; .
PfamPF00009; GTP_EFTU; 1; .
PfamPF03144; GTP_EFTU_D2; 1; .
PfamPF03143; GTP_EFTU_D3; 1; .
SUPFAMSSF50465; Elong_init_C; 1; .
SUPFAMSSF50447; Translat_factor; 1; .
TIGRFAMsTIGR00483; EF-1_alpha; 1; .

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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server