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World-2DPAGE Repository
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Searching in 'World-2DPAGE Repository [0030]' for entry
matching:
EF1D_RAT
World-2DPAGE Repository
(0030):
EF1D_RAT
EF1D_RAT
General information about the entry
View entry in simple text format
Entry name
EF1D_RAT
Primary accession number
Q68FR9
integrated into World-2DPAGE Repository (0030) on
November 9, 2010 (release 1)
2D Annotations were last modified on
June 21, 2011 (version 2)
General Annotations were last modified on
November 23, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Elongation factor 1-delta; Short=EF-1-delta;.
Gene name
Name=Eef1d
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.201000006
;
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein
RAT_INS1E_4-7
{INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
map experimental info
RAT_INS1E_4-7
MAP LOCATIONS:
SPOT 1680
:
pI=4.83; Mw=40771
[identification data]
SPOT 1688
:
pI=4.90; Mw=40715
[identification data]
SPOT 1739
:
pI=4.92; Mw=38737
[identification data]
SPOT 1748
:
pI=4.84; Mw=38683
[identification data]
IDENTIFICATION:
SPOT 1680: Mascot protein score=354. Number of peptides=8 [
1
]
SPOT 1688: Mascot protein score=151. Number of peptides=5 [
1
]; SPOT 1739: Mascot protein score=192. Number of peptides=5 [
1
]; SPOT 1748: Mascot protein score=151. Number of peptides=5 [
1
].
MAPPING (identification):
SPOT
1680
:
Tandem mass spectrometry
[
1
];
SPOT
1688
:
Tandem mass spectrometry
[
1
];
SPOT
1739
:
Tandem mass spectrometry
[
1
];
SPOT
1748
:
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
Cross-references
UniProtKB/Swiss-Prot
Q68FR9; EF1D_RAT.
World-2DPAGE Repository
Q68FR9; EF1D_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
EF1D_RAT
Primary accession number
Q68FR9
Sequence was last modified on
September 1, 2009 (version 2)
Annotations were last modified on
November 16, 2011 (version 54)
Name and origin of the protein
Description
RecName: Full=Elongation factor 1-delta; Short=EF-1-delta;
Gene name
Name=Eef1d
Encoded on
Name=Eef1d
Keywords
Acetylation
;
Alternative splicing
;
Complete proteome
;
Elongation factor
;
Phosphoprotein
;
Protein biosynthesis
;
Reference proteome
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
CH473950; EDM16037.1
; -; Genomic_DNA
EMBL
BC079391; AAH79391.1
; -; mRNA
IPI
IPI00471525; -
; .
IPI
IPI00944235; -
; .
RefSeq
NP_001013122.1; NM_001013104.1
; .
UniGene
Rn.71883; -
; .
HSSP
P24534; 1B64
; .
IntAct
Q68FR9; 1
; .
STRING
Q68FR9; -
; .
PhosphoSite
Q68FR9; -
; .
PRIDE
Q68FR9; -
; .
GeneID
300033; -
; .
KEGG
rno:300033; -
; .
UCSC
NM_001013104; rat
; .
CTD
1936; -
; .
RGD
621174; Eef1d
; .
eggNOG
roNOG04995; -
; .
InParanoid
Q68FR9; -
; .
OrthoDB
EOG4CJVGT; -
; .
PhylomeDB
Q68FR9; -
; .
NextBio
646165; -
; .
ArrayExpress
Q68FR9; -
; .
Genevestigator
Q68FR9; -
; .
GO
GO:0005853; C:eukaryotic translation elongation factor 1 complex
; IEA:InterPro; .
GO
GO:0003746; F:translation elongation factor activity
; IEA:UniProtKB-KW; .
InterPro
IPR018940; EF-1_beta_acid_region_euk
; .
InterPro
IPR014717; Transl_elong_EF1B/ribosomal_S6
; .
InterPro
IPR001326; Transl_elong_EF1B_B/D_CS
; .
InterPro
IPR014038; Transl_elong_fac_EF1B_bsu/dsu
; .
Gene3D
G3DSA:3.30.70.60; Transl_elong_EF1B/rib_con
; 1; .
KO
K15410; -
; .
Pfam
PF10587; EF-1_beta_acid
; 1; .
Pfam
PF00736; EF1_GNE
; 1; .
SMART
SM00888; EF1_GNE
; 1; .
SUPFAM
SSF54984; Transl_elong_EF1B_B/D_G_exch
; 1; .
PROSITE
PS00825; EF1BD_2
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
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