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Searching in 'World-2DPAGE Repository [0030]' for entry matching: EF1D_RAT




World-2DPAGE Repository (0030):  EF1D_RAT

EF1D_RAT


General information about the entry
View entry in simple text format
Entry nameEF1D_RAT
Primary accession numberQ68FR9
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Elongation factor 1-delta; Short=EF-1-delta;.
Gene nameName=Eef1d
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000006;
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
RAT_INS1E_4-7
  map experimental info 		 
RAT_INS1E_4-7

MAP LOCATIONS:
pI=4.83; Mw=40771  [identification data]
pI=4.90; Mw=40715  [identification data]
pI=4.92; Mw=38737  [identification data]
pI=4.84; Mw=38683  [identification data]

IDENTIFICATION: SPOT 1680: Mascot protein score=354. Number of peptides=8 [1]
SPOT 1688: Mascot protein score=151. Number of peptides=5 [1]; SPOT 1739: Mascot protein score=192. Number of peptides=5 [1]; SPOT 1748: Mascot protein score=151. Number of peptides=5 [1].
MAPPING (identification):
SPOT 1680: Tandem mass spectrometry [1];
SPOT 1688: Tandem mass spectrometry [1];
SPOT 1739: Tandem mass spectrometry [1];
SPOT 1748: Tandem mass spectrometry [1].

Copyright
Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
Cross-references
UniProtKB/Swiss-ProtQ68FR9; EF1D_RAT.
World-2DPAGE RepositoryQ68FR9; EF1D_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameEF1D_RAT
Primary accession numberQ68FR9
Sequence was last modified on September 1, 2009 (version 2)
Annotations were last modified on November 16, 2011 (version 54)
Name and origin of the protein
DescriptionRecName: Full=Elongation factor 1-delta; Short=EF-1-delta;
Gene nameName=Eef1d
Encoded onName=Eef1d
KeywordsAcetylation; Alternative splicing; Complete proteome; Elongation factor; Phosphoprotein; Protein biosynthesis; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLCH473950; EDM16037.1; -; Genomic_DNA
EMBLBC079391; AAH79391.1; -; mRNA
IPIIPI00471525; -; .
IPIIPI00944235; -; .
RefSeqNP_001013122.1; NM_001013104.1; .
UniGeneRn.71883; -; .
HSSPP24534; 1B64; .
IntActQ68FR9; 1; .
STRINGQ68FR9; -; .
PhosphoSiteQ68FR9; -; .
PRIDEQ68FR9; -; .
GeneID300033; -; .
KEGGrno:300033; -; .
UCSCNM_001013104; rat; .
CTD1936; -; .
RGD621174; Eef1d; .
eggNOGroNOG04995; -; .
InParanoidQ68FR9; -; .
OrthoDBEOG4CJVGT; -; .
PhylomeDBQ68FR9; -; .
NextBio646165; -; .
ArrayExpressQ68FR9; -; .
GenevestigatorQ68FR9; -; .
GOGO:0005853; C:eukaryotic translation elongation factor 1 complex; IEA:InterPro; .
GOGO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW; .
InterProIPR018940; EF-1_beta_acid_region_euk; .
InterProIPR014717; Transl_elong_EF1B/ribosomal_S6; .
InterProIPR001326; Transl_elong_EF1B_B/D_CS; .
InterProIPR014038; Transl_elong_fac_EF1B_bsu/dsu; .
Gene3DG3DSA:3.30.70.60; Transl_elong_EF1B/rib_con; 1; .
KOK15410; -; .
PfamPF10587; EF-1_beta_acid; 1; .
PfamPF00736; EF1_GNE; 1; .
SMARTSM00888; EF1_GNE; 1; .
SUPFAMSSF54984; Transl_elong_EF1B_B/D_G_exch; 1; .
PROSITEPS00825; EF1BD_2; 1; .


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