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Searching in 'World-2DPAGE Repository [0030]' for entry matching: FINC_RAT

World-2DPAGE Repository (0030):  FINC_RAT


General information about the entry
View entry in simple text format
Entry nameFINC_RAT
Primary accession numberP04937
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Fibronectin; Short=FN; Contains: RecName: Full=Anastellin; Flags: Precursor;.
Gene nameName=Fn1
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
  map experimental info

pI=6.42; Mw=73501  [identification data]

IDENTIFICATION: SPOT 700: Mascot protein score=53. Number of peptides=3 [1].
MAPPING (identification):
SPOT 700: Tandem mass spectrometry [1].

Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
UniProtKB/Swiss-ProtP04937; FINC_RAT.
World-2DPAGE RepositoryP04937; FINC_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameFINC_RAT
Primary accession numberP04937
Secondary accession number(s) Q6LDX9
Sequence was last modified on November 1, 1990 (version 2)
Annotations were last modified on October 19, 2011 (version 124)
Name and origin of the protein
DescriptionRecName: Full=Fibronectin; Short=FN; Contains: RecName: Full=Anastellin; Flags: Precursor;
Gene nameName=Fn1
Encoded onName=Fn1
KeywordsAcute phase; Alternative splicing; Angiogenesis; Cell adhesion; Cell shape; Complete proteome; Direct protein sequencing; Disulfide bond; Extracellular matrix; Glycoprotein; Heparin-binding; Isopeptide bond; Phosphoprotein; Pyrrolidone carboxylic acid; Reference proteome; Repeat; Secreted; Signal; Sulfation.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLX15906; CAA34020.1; -; mRNA
EMBLL29191; AAA41166.1; -; Genomic_DNA
EMBLL00191; AAA41166.1; JOINED; Genomic_DNA
EMBLL29191; AAA41167.1; -; Genomic_DNA
EMBLL00191; AAA41167.1; JOINED; Genomic_DNA
EMBLL29191; AAA41168.1; -; Genomic_DNA
EMBLL00191; AAA41168.1; JOINED; Genomic_DNA
EMBLM11750; AAA41170.1; -; Genomic_DNA
EMBLX05831; CAA29278.1; -; Genomic_DNA
EMBLX05832; CAA29279.1; -; Genomic_DNA
EMBLX05833; CAA29280.1; -; Genomic_DNA
EMBLX05834; CAA29281.1; -; Genomic_DNA
IPIIPI00200757; -; .
IPIIPI00231982; -; .
IPIIPI00231983; -; .
IPIIPI00231984; -; .
PIRS14428; S14428; .
UniGeneRn.1604; -; .
ProteinModelPortalP04937; -; .
SMRP04937; 49-274; 305-464; 609-808
1172-16301721-2081; 2332-2389; .
MINTMINT-5024668; -; .
STRINGP04937; -; .
PRIDEP04937; -; .
UCSCNM_019143; rat; .
RGD2624; Fn1; .
eggNOGroNOG06867; -; .
HOVERGENHBG005731; -; .
InParanoidP04937; -; .
OrthoDBEOG4W3SM1; -; .
ArrayExpressP04937; -; .
GenevestigatorP04937; -; .
GermOnlineENSRNOG00000014288; Rattus norvegicus; .
GOGO:0005604; C:basement membrane; IDA:RGD; .
GOGO:0005201; F:extracellular matrix structural constituent; TAS:RGD; .
GOGO:0008201; F:heparin binding; IEA:UniProtKB-KW; .
GOGO:0045340; F:mercury ion binding; IDA:RGD; .
GOGO:0002020; F:protease binding; IPI:RGD; .
GOGO:0006953; P:acute-phase response; IEA:UniProtKB-KW; .
GOGO:0001525; P:angiogenesis; IEA:UniProtKB-KW; .
GOGO:0006916; P:anti-apoptosis; IMP:RGD; .
GOGO:0007160; P:cell-matrix adhesion; IMP:RGD; .
GOGO:0030198; P:extracellular matrix organization; IMP:RGD; .
GOGO:0001503; P:ossification; TAS:RGD; .
GOGO:0008360; P:regulation of cell shape; IEA:UniProtKB-KW; .
InterProIPR016060; Complement_control_module; .
InterProIPR000083; Fibronectin_type1; .
InterProIPR003961; Fibronectin_type3; .
InterProIPR000562; FN_type2_col-bd; .
InterProIPR013783; Ig-like_fold; .
InterProIPR013806; Kringle-like; .
Gene3DG3DSA:; Complement_control_module; 12; .
Gene3DG3DSA:; FN2; 2; .
Gene3DG3DSA:; Ig-like_fold; 17; .
PfamPF00039; fn1; 12; .
PfamPF00040; fn2; 2; .
PfamPF00041; fn3; 17; .
SMARTSM00058; FN1; 12; .
SMARTSM00059; FN2; 2; .
SMARTSM00060; FN3; 17; .
SUPFAMSSF49265; FN_III-like; 17; .
SUPFAMSSF57440; Kringle-like; 2; .
PROSITEPS00022; EGF_1; 2; .
PROSITEPS01253; FN1_1; 12; .
PROSITEPS51091; FN1_2; 12; .
PROSITEPS00023; FN2_1; 2; .
PROSITEPS51092; FN2_2; 2; .
PROSITEPS50853; FN3; 17; .

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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server