resource logo

World-2DPAGE Repository

Attention: World-2DPAGE is no longer maintained.

World-2DPAGE Repository no longer accepts submissions.


World-2DPAGE Repository 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] 
[graphical interface]

     Databases

use 'Ctrl' to select several
databases


Select Remote Interfaces
[All Interfaces]
SWISS-2DPAGE
World-2DPAGE Portal

Exclude local DBs
has only effect if a remote
interface is selected
     
Searching in 'World-2DPAGE Repository [0014]' for entry matching: GBB5_RAT




World-2DPAGE Repository (0014):  GBB5_RAT


GBB5_RAT


General information about the entry
View entry in simple text format
Entry nameGBB5_RAT
Primary accession numberP62882
integrated into World-2DPAGE Repository (0014) on October 13, 2008 (release 1)
2D Annotations were last modified onJune 1, 2011 (version 3)
General Annotations were last modified on November 25, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Guanine nucleotide-binding protein subunit beta-5; AltName: Full=Gbeta5; AltName: Full=Transducin beta chain 5;.
Gene nameName=Gnb5
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.200900680;
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_CEREBELLUM_21D {Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
RAT_CEREBELLUM_21D
  map experimental info
 
RAT_CEREBELLUM_21D

MAP LOCATIONS:
pI=5.74; Mw=42000  [identification data]

IDENTIFICATION: SPOT 2968: SeqCov=41%. MascotPMF=97 [1].
MAPPING (identification):
SPOT 2968: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
PRIDE10017.
UniProtKB/Swiss-ProtP62882; GBB5_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameGBB5_RAT
Primary accession numberP62882
Secondary accession number(s) O35354 P54314 Q5FWS8 Q91WB3
Sequence was last modified on August 16, 2004 (version 1)
Annotations were last modified on November 16, 2011 (version 57)
Name and origin of the protein
DescriptionRecName: Full=Guanine nucleotide-binding protein subunit beta-5; AltName: Full=Gbeta5; AltName: Full=Transducin beta chain 5;
Gene nameName=Gnb5
Encoded onName=Gnb5
KeywordsComplete proteome; Reference proteome; Repeat; Transducer; WD repeat.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLAF001953; AAB59974.1; -; mRNA
EMBLAY552803; AAS59141.1; -; mRNA
EMBLBC089221; AAH89221.1; -; mRNA
EMBLAF022086; AAB82553.1; -; mRNA
IPIIPI00212659; -; .
RefSeqNP_113958.1; NM_031770.3; .
UniGeneRn.23042; -; .
ProteinModelPortalP62882; -; .
SMRP62882; 1-353; .
PhosphoSiteP62882; -; .
PRIDEP62882; -; .
GeneID83579; -; .
KEGGrno:83579; -; .
CTD10681; -; .
RGD620759; Gnb5; .
eggNOGroNOG06978; -; .
HOVERGENHBG000188; -; .
PhylomeDBP62882; -; .
NextBio616103; -; .
GenevestigatorP62882; -; .
GOGO:0005834; C:heterotrimeric G-protein complex; TAS:RGD; .
GOGO:0004871; F:signal transducer activity; IEA:UniProtKB-KW; .
GOGO:0007186; P:G-protein coupled receptor signaling pathway; TAS:RGD; .
InterProIPR020472; G-protein_beta_WD-40_rep; .
InterProIPR001632; Gprotein_B; .
InterProIPR016346; Guanine_nucleotide-bd_bsu; .
InterProIPR015943; WD40/YVTN_repeat-like_dom; .
InterProIPR001680; WD40_repeat; .
InterProIPR011046; WD40_repeat-like_dom; .
InterProIPR019782; WD40_repeat_2; .
InterProIPR019775; WD40_repeat_CS; .
InterProIPR017986; WD40_repeat_dom; .
InterProIPR019781; WD40_repeat_subgr; .
Gene3DG3DSA:2.130.10.10; WD40/YVTN_repeat-like; 1; .
KOK04539; -; .
PfamPF00400; WD40; 7; .
PIRSFPIRSF002394; GN-bd_beta; 1; .
PRINTSPR00319; GPROTEINB; .
PRINTSPR00320; GPROTEINBRPT; .
SMARTSM00320; WD40; 7; .
SUPFAMSSF50978; WD40_like; 1; .
PROSITEPS00678; WD_REPEATS_1; 3; .
PROSITEPS50082; WD_REPEATS_2; 6; .
PROSITEPS50294; WD_REPEATS_REGION; 1; .



World-2DPAGE Repository image

World-2DPAGE Repository (search AC)


Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server