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Searching in 'World-2DPAGE Repository [0030]' for entry matching: GDIA_RAT




World-2DPAGE Repository (0030):  GDIA_RAT

GDIA_RAT


General information about the entry
View entry in simple text format
Entry nameGDIA_RAT
Primary accession numberP50398
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Rab GDP dissociation inhibitor alpha; Short=Rab GDI alpha; AltName: Full=Guanosine diphosphate dissociation inhibitor 1; Short=GDI-1;.
Gene nameName=Gdi1
Synonyms=Rabgdia
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000006;
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
RAT_INS1E_4-7
  map experimental info 		 
RAT_INS1E_4-7

MAP LOCATIONS:
pI=4.92; Mw=70610  [identification data]

IDENTIFICATION: SPOT 777: Mascot protein score=55. Number of peptides=4 [1].
MAPPING (identification):
SPOT 777: Tandem mass spectrometry [1].

Copyright
Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
Cross-references
UniProtKB/Swiss-ProtP50398; GDIA_RAT.
World-2DPAGE RepositoryP50398; GDIA_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameGDIA_RAT
Primary accession numberP50398
Secondary accession number(s) Q499U0 Q9R274
Sequence was last modified on October 1, 1996 (version 1)
Annotations were last modified on September 21, 2011 (version 83)
Name and origin of the protein
DescriptionRecName: Full=Rab GDP dissociation inhibitor alpha; Short=Rab GDI alpha; AltName: Full=Guanosine diphosphate dissociation inhibitor 1; Short=GDI-1;
Gene nameName=Gdi1
Synonyms=Rabgdia
Encoded onName=Gdi1; Synonyms=Rabgdia
KeywordsComplete proteome; Cytoplasm; Direct protein sequencing; GTPase activation; Phosphoprotein; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLX74402; CAA52413.1; -; mRNA
EMBLU07952; AAB16909.1; -; mRNA
EMBLBC099763; AAH99763.1; -; mRNA
EMBLAF130987; AAD25536.1; -; mRNA
IPIIPI00324986; -; .
PIRA54091; A54091; .
PIRB56024; B56024; .
RefSeqNP_058784.2; NM_017088.2; .
UniGeneRn.4000; -; .
ProteinModelPortalP50398; -; .
SMRP50398; 1-431; .
STRINGP50398; -; .
PhosphoSiteP50398; -; .
World-2DPAGE0004:P50398; -; .
PRIDEP50398; -; .
EnsemblENSRNOT00000056295; ENSRNOP00000053135; ENSRNOG00000037245; .
GeneID25183; -; .
KEGGrno:25183; -; .
UCSCBC072538; rat; .
CTD2664; -; .
RGD2676; Gdi1; .
eggNOGmaNOG16589; -; .
HOVERGENHBG000839; -; .
InParanoidP50398; -; .
OMACKQVYCD; -; .
OrthoDBEOG4H19VS; -; .
PhylomeDBP50398; -; .
NextBio605677; -; .
ArrayExpressP50398; -; .
GenevestigatorP50398; -; .
GermOnlineENSRNOG00000037245; Rattus norvegicus; .
GOGO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell; .
GOGO:0043234; C:protein complex; IDA:RGD; .
GOGO:0019717; C:synaptosome; IDA:RGD; .
GOGO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW; .
GOGO:0005515; F:protein binding; IPI:RGD; .
GOGO:0005093; F:Rab GDP-dissociation inhibitor activity; IDA:RGD; .
GOGO:0015031; P:protein transport; IEA:InterPro; .
GOGO:0051592; P:response to calcium ion; IDA:RGD; .
InterProIPR018203; GDP_dissociation_inhibitor; .
InterProIPR000806; RabGDI; .
PfamPF00996; GDI; 1; .
PRINTSPR00892; RABGDI; .
PRINTSPR00891; RABGDIREP; .


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