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World-2DPAGE Repository

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Searching in 'World-2DPAGE Repository [0014]' for entry matching: GFAP_RAT

World-2DPAGE Repository (0014):  GFAP_RAT


General information about the entry
View entry in simple text format
Entry nameGFAP_RAT
Primary accession numberP47819
integrated into World-2DPAGE Repository (0014) on October 13, 2008 (release 1)
2D Annotations were last modified onJune 1, 2011 (version 3)
General Annotations were last modified on November 25, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Glial fibrillary acidic protein; Short=GFAP;.
Gene nameName=Gfap
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_CEREBELLUM_21D {Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
  map experimental info

pI=5.35; Mw=49000  [identification data]

IDENTIFICATION: SPOT 2888: SeqCov=65%. MascotPMF=269 [1].
MAPPING (identification):
SPOT 2888: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
UniProtKB/Swiss-ProtP47819; GFAP_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameGFAP_RAT
Primary accession numberP47819
Secondary accession number(s) Q7TQ31 Q9R1Q3 Q9Z2S0
Sequence was last modified on September 19, 2006 (version 2)
Annotations were last modified on November 16, 2011 (version 97)
Name and origin of the protein
DescriptionRecName: Full=Glial fibrillary acidic protein; Short=GFAP;
Gene nameName=Gfap
Encoded onName=Gfap
KeywordsAlternative splicing; Coiled coil; Complete proteome; Cytoplasm; Direct protein sequencing; Intermediate filament; Phosphoprotein; Reference proteome.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLU03700; AAA20540.1; -; mRNA
EMBLAF028784; AAD01873.1; -; Genomic_DNA
EMBLAF028784; AAD01874.2; -; Genomic_DNA
EMBLBC088851; AAH88851.1; -; mRNA
EMBLZ48978; CAA88842.1; -; Genomic_DNA
EMBLAY142198; AAN87911.1; -; Genomic_DNA
IPIIPI00190943; -; .
IPIIPI00210211; -; .
PIRI56572; I56572; .
RefSeqNP_058705.2; NM_017009.2; .
UniGeneRn.91512; -; .
ProteinModelPortalP47819; -; .
SMRP47819; 65-102; 292-370; .
IntActP47819; 1; .
STRINGP47819; -; .
PhosphoSiteP47819; -; .
World-2DPAGE0004:P47819; -; .
PRIDEP47819; -; .
EnsemblENSRNOT00000034401; ENSRNOP00000032389; ENSRNOG00000002919; .
GeneID24387; -; .
KEGGrno:24387; -; .
UCSCBC088851; rat; .
CTD2670; -; .
RGD2679; Gfap; .
GeneTreeENSGT00560000076592; -; .
HOVERGENHBG013015; -; .
InParanoidP47819; -; .
OrthoDBEOG48WC24; -; .
PhylomeDBP47819; -; .
NextBio603163; -; .
ArrayExpressP47819; -; .
GenevestigatorP47819; -; .
GermOnlineENSRNOG00000002919; Rattus norvegicus; .
GOGO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell; .
GOGO:0005882; C:intermediate filament; NAS:RGD; .
GOGO:0005178; F:integrin binding; IDA:MGI; .
GOGO:0019900; F:kinase binding; IPI:RGD; .
GOGO:0005200; F:structural constituent of cytoskeleton; IDA:RGD; .
GOGO:0009611; P:response to wounding; IDA:RGD; .
InterProIPR016044; F; .
InterProIPR001664; IF; .
InterProIPR018039; Intermediate_filament_CS; .
KOK05640; -; .
PANTHERPTHR23239; IF; 1; .
PfamPF00038; Filament; 1; .
PROSITEPS00226; IF; 1; .

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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server