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Searching in 'World-2DPAGE Repository [0022]' for entry matching: HEMO_RAT




World-2DPAGE Repository (0022):  HEMO_RAT

HEMO_RAT


General information about the entry
View entry in simple text format
Entry nameHEMO_RAT
Primary accession numberP20059
integrated into World-2DPAGE Repository (0022) on May 7, 2010 (release 1)
2D Annotations were last modified onJune 22, 2011 (version 2)
General Annotations were last modified on November 24, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Hemopexin; Flags: Precursor;.
Gene nameName=Hpx
Annotated speciesRattus [TaxID: 10114]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000593;
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

HCR_LCR_HEART {HCR LCR Cardiac Map}
Rattus
Tissue: Heart
HCR_LCR_HEART
  map experimental info 		 
HCR_LCR_HEART

MAP LOCATIONS:
pI=7.58; Mw=52060  [identification data]
pI=7.58; Mw=52060  [identification data]
pI=7.58; Mw=52060  [identification data]

IDENTIFICATION: SPOT 219: SeqCov=28.5%. Peptides MS=12/20. Mascot PMF Score=113 [1]
SPOT 533: SeqCov=29.1%. Peptides MS=13/20. Mascot PMF Score=129 [1]; SPOT 742: SeqCov=18.7%. Peptides MS=6/20. Mascot PMF Score=42 [1].
PEPTIDE EVIDENCE: SPOT 219: 167-WFWDFATR-174 (36) / 270-GATYAFSGSHYWR-282 (68) / 130-LFQEEFPGIPYPPDAAVECHR-150 (64) [1]
SPOT 742: 167-WFWDFATR-174 (27) / 270-GATYAFSGSHYWR-282 (50) / 130-LFQEEFPGIPYPPDAAVECHR-150 (76) [1].
MAPPING (identification):
SPOT 219: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 533: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 742: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Jatin Burniston, Liverpool John Moores University, UK
Cross-references
UniProtKB/Swiss-ProtP20059; HEMO_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameHEMO_RAT
Primary accession numberP20059
Secondary accession number(s) Q5BKB4
Sequence was last modified on January 9, 2007 (version 3)
Annotations were last modified on September 21, 2011 (version 94)
Name and origin of the protein
DescriptionRecName: Full=Hemopexin; Flags: Precursor;
Gene nameName=Hpx
Encoded onName=Hpx
KeywordsComplete proteome; Direct protein sequencing; Disulfide bond; Glycoprotein; Heme; Iron; Metal-binding; Reference proteome; Repeat; Secreted; Signal; Transport.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLM62642; AAA41337.1; -; Genomic_DNA
EMBLX60006; CAA42621.1; -; Genomic_DNA
EMBLBC091137; AAH91137.1; -; mRNA
IPIIPI00195516; -; .
PIRA43079; OQRT; .
RefSeqNP_445770.1; NM_053318.1; .
UniGeneRn.2380; -; .
ProteinModelPortalP20059; -; .
SMRP20059; 47-460; .
STRINGP20059; -; .
PRIDEP20059; -; .
EnsemblENSRNOT00000024710; ENSRNOP00000024710; ENSRNOG00000018257; .
GeneID58917; -; .
KEGGrno:58917; -; .
NMPDRfig|10116.3.peg.2633; -; .
UCSCNM_053318; rat; .
CTD3263; -; .
RGD62040; Hpx; .
eggNOGroNOG15201; -; .
GeneTreeENSGT00390000009178; -; .
HOVERGENHBG005956; -; .
InParanoidP20059; -; .
OMACHRGECQ; -; .
OrthoDBEOG4R502N; -; .
PhylomeDBP20059; -; .
ArrayExpressP20059; -; .
GenevestigatorP20059; -; .
GermOnlineENSRNOG00000018257; Rattus norvegicus; .
GOGO:0005576; C:extracellular region; IEA:UniProtKB-SubCell; .
GOGO:0046872; F:metal ion binding; IEA:UniProtKB-KW; .
GOGO:0006810; P:transport; IEA:UniProtKB-KW; .
InterProIPR000585; Hemopexin/matrixin; .
InterProIPR018486; Hemopexin/matrixin_CS; .
InterProIPR018487; Hemopexin/matrixin_repeat; .
InterProIPR016358; Hemopexin_chordata; .
Gene3DG3DSA:2.110.10.10; Hemopexin; 2; .
PfamPF00045; Hemopexin; 4; .
PIRSFPIRSF002551; Hemopexin_chordata; 1; .
SMARTSM00120; HX; 5; .
SUPFAMSSF50923; Hemopexin; 2; .
PROSITEPS00024; HEMOPEXIN; 1; .


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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server