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Searching in 'World-2DPAGE Repository [0004]' for entry matching: HNRH1_RAT




World-2DPAGE Repository (0004):  HNRH1_RAT

HNRH1_RAT


General information about the entry
View entry in simple text format
Entry nameHNRH1_RAT
Primary accession numberQ8VHV7
integrated into World-2DPAGE Repository (0004) on October 13, 2008 (release 1)
2D Annotations were last modified onMay 18, 2011 (version 2)
General Annotations were last modified on December 22, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Heterogeneous nuclear ribonucleoprotein H; Short=hnRNP H; AltName: Full=Ratsg1; Contains: RecName: Full=Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;.
Gene nameName=Hnrnph1
Synonyms=Hnrph, Hnrph1
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   MAPPING ON GEL
PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
OB21DSUB
  map experimental info 		 
OB21DSUB

MAP LOCATIONS:
pI=5.80; Mw=50000  [identification data]

MAPPING (identification):
SPOT 349: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
UniProtKB/Swiss-ProtQ8VHV7; HNRH1_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameHNRH1_RAT
Primary accession numberQ8VHV7
Secondary accession number(s) A1L1J1
Sequence was last modified on May 29, 2007 (version 2)
Annotations were last modified on November 16, 2011 (version 72)
Name and origin of the protein
DescriptionRecName: Full=Heterogeneous nuclear ribonucleoprotein H; Short=hnRNP H; AltName: Full=Ratsg1; Contains: RecName: Full=Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;
Gene nameName=Hnrnph1
Synonyms=Hnrph, Hnrph1
Encoded onName=Hnrnph1; Synonyms=Hnrph, Hnrph1
KeywordsAcetylation; Alternative splicing; Complete proteome; Direct protein sequencing; Methylation; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Reference proteome; Repeat; Ribonucleoprotein; RNA-binding; Spliceosome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLAF367468; AAL59557.1; -; mRNA
EMBLAABR03073723; -; NOT_ANNOTATED_CDS; Genomic_DNA
EMBLBC129087; AAI29088.1; -; mRNA
IPIIPI00202027; -; .
IPIIPI00851133; -; .
IPIIPI00851145; -; .
RefSeqNP_543172.1; NM_080896.1; .
UniGeneRn.23677; -; .
HSSPP55795; 1WG5; .
ProteinModelPortalQ8VHV7; -; .
SMRQ8VHV7; 1-102; 105-193; 283-365
IntActQ8VHV7; 1; .
STRINGQ8VHV7; -; .
PhosphoSiteQ8VHV7; -; .
World-2DPAGE0004:Q8VHV7; -; .
PRIDEQ8VHV7; -; .
GeneID140931; -; .
KEGGrno:140931; -; .
UCSCNM_080896; rat; .
CTD140931; -; .
RGD620840; Hnrph1; .
eggNOGmaNOG09440; -; .
GeneTreeENSGT00550000074195; -; .
HOVERGENHBG055557; -; .
NextBio620799; -; .
ArrayExpressQ8VHV7; -; .
GenevestigatorQ8VHV7; -; .
GOGO:0005654; C:nucleoplasm; IDA:RGD; .
GOGO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW; .
GOGO:0000166; F:nucleotide binding; IEA:InterPro; .
GOGO:0003723; F:RNA binding; ISS:UniProtKB; .
GOGO:0006397; P:mRNA processing; IEA:UniProtKB-KW; .
GOGO:0043484; P:regulation of RNA splicing; ISS:UniProtKB; .
GOGO:0008380; P:RNA splicing; IEA:UniProtKB-KW; .
InterProIPR012677; Nucleotide-bd_a/b_plait; .
InterProIPR000504; RRM_dom; .
InterProIPR012996; Znf_CHHC; .
Gene3DG3DSA:3.30.70.330; a_b_plait_nuc_bd; 3; .
KOK12898; -; .
PfamPF00076; RRM_1; 3; .
PfamPF08080; zf-RNPHF; 1; .
SMARTSM00360; RRM; 3; .
PROSITEPS50102; RRM; 3; .


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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server