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World-2DPAGE Repository
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Select Remote Interfaces
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SWISS-2DPAGE
World-2DPAGE Portal
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Searching in 'World-2DPAGE Repository [0004]' for entry
matching:
HNRH1_RAT
World-2DPAGE Repository
(0004):
HNRH1_RAT
HNRH1_RAT
General information about the entry
View entry in simple text format
Entry name
HNRH1_RAT
Primary accession number
Q8VHV7
integrated into World-2DPAGE Repository (0004) on
October 13, 2008 (release 1)
2D Annotations were last modified on
May 18, 2011 (version 2)
General Annotations were last modified on
December 22, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Heterogeneous nuclear ribonucleoprotein H; Short=hnRNP H; AltName: Full=Ratsg1; Contains: RecName: Full=Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;.
Gene name
Name=Hnrnph1
Synonyms=Hnrph, Hnrph1
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
MAPPING ON GEL
PubMed=19343716; DOI=
10.1002/pmic.200800664
; [
NCBI
,
EBI
,
Israel
,
Japan
]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein
OB21DSUB
{2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
map experimental info
OB21DSUB
MAP LOCATIONS:
SPOT 349
:
pI=5.80; Mw=50000
[identification data]
MAPPING (identification):
SPOT
349
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
UniProtKB/Swiss-Prot
Q8VHV7; HNRH1_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_12
Entry name
HNRH1_RAT
Primary accession number
Q8VHV7
Secondary accession number(s)
A1L1J1
Sequence was last modified on
May 29, 2007 (version 2)
Annotations were last modified on
November 16, 2011 (version 72)
Name and origin of the protein
Description
RecName: Full=Heterogeneous nuclear ribonucleoprotein H; Short=hnRNP H; AltName: Full=Ratsg1; Contains: RecName: Full=Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;
Gene name
Name=Hnrnph1
Synonyms=Hnrph, Hnrph1
Encoded on
Name=Hnrnph1; Synonyms=Hnrph, Hnrph1
Keywords
Acetylation
;
Alternative splicing
;
Complete proteome
;
Direct protein sequencing
;
Methylation
;
mRNA processing
;
mRNA splicing
;
Nucleus
;
Phosphoprotein
;
Reference proteome
;
Repeat
;
Ribonucleoprotein
;
RNA-binding
;
Spliceosome
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
AF367468; AAL59557.1
; -; mRNA
EMBL
AABR03073723; -
; NOT_ANNOTATED_CDS; Genomic_DNA
EMBL
BC129087; AAI29088.1
; -; mRNA
IPI
IPI00202027; -
; .
IPI
IPI00851133; -
; .
IPI
IPI00851145; -
; .
RefSeq
NP_543172.1; NM_080896.1
; .
UniGene
Rn.23677; -
; .
HSSP
P55795; 1WG5
; .
ProteinModelPortal
Q8VHV7; -
; .
SMR
Q8VHV7; 1-102
; 105-193; 283-365
IntAct
Q8VHV7; 1
; .
STRING
Q8VHV7; -
; .
PhosphoSite
Q8VHV7; -
; .
World-2DPAGE
0004:Q8VHV7; -
; .
PRIDE
Q8VHV7; -
; .
GeneID
140931; -
; .
KEGG
rno:140931; -
; .
UCSC
NM_080896; rat
; .
CTD
140931; -
; .
RGD
620840; Hnrph1
; .
eggNOG
maNOG09440; -
; .
GeneTree
ENSGT00550000074195; -
; .
HOVERGEN
HBG055557; -
; .
NextBio
620799; -
; .
ArrayExpress
Q8VHV7; -
; .
Genevestigator
Q8VHV7; -
; .
GO
GO:0005654; C:nucleoplasm
; IDA:RGD; .
GO
GO:0005681; C:spliceosomal complex
; IEA:UniProtKB-KW; .
GO
GO:0000166; F:nucleotide binding
; IEA:InterPro; .
GO
GO:0003723; F:RNA binding
; ISS:UniProtKB; .
GO
GO:0006397; P:mRNA processing
; IEA:UniProtKB-KW; .
GO
GO:0043484; P:regulation of RNA splicing
; ISS:UniProtKB; .
GO
GO:0008380; P:RNA splicing
; IEA:UniProtKB-KW; .
InterPro
IPR012677; Nucleotide-bd_a/b_plait
; .
InterPro
IPR000504; RRM_dom
; .
InterPro
IPR012996; Znf_CHHC
; .
Gene3D
G3DSA:3.30.70.330; a_b_plait_nuc_bd
; 3; .
KO
K12898; -
; .
Pfam
PF00076; RRM_1
; 3; .
Pfam
PF08080; zf-RNPHF
; 1; .
SMART
SM00360; RRM
; 3; .
PROSITE
PS50102; RRM
; 3; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
Expasy web server