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World-2DPAGE Repository
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Searching in 'World-2DPAGE Repository [0022]' for entry
matching:
HSPB6_RAT
World-2DPAGE Repository
(0022):
HSPB6_RAT
HSPB6_RAT
General information about the entry
View entry in simple text format
Entry name
HSPB6_RAT
Primary accession number
P97541
integrated into World-2DPAGE Repository (0022) on
May 7, 2010 (release 1)
2D Annotations were last modified on
June 22, 2011 (version 2)
General Annotations were last modified on
November 24, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Heat shock protein beta-6; Short=HspB6; AltName: Full=Heat shock 20 kDa-like protein p20;.
Gene name
Name=Hspb6
Annotated species
Rattus [TaxID:
10114
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.201000593
;
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)
2D PAGE maps for identified proteins
How to interpret a protein
HCR_LCR_HEART
{HCR LCR Cardiac Map}
Rattus
Tissue: Heart
map experimental info
HCR_LCR_HEART
MAP LOCATIONS:
SPOT 296
:
pI=6.05; Mw=17551
[identification data]
IDENTIFICATION:
SPOT 296: SeqCov=68.5%. Peptides MS=9/20. Mascot PMF Score=115 [
1
].
PEPTIDE EVIDENCE:
SPOT 296: 5-VPVQPSWLR-13 (45) / 103-HEERPDEHGFIAR-115 (91) / 33-FGEGLLEAELASLCPAAIAPYYLR-56 (70) [
1
].
MAPPING (identification):
SPOT
296
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Jatin Burniston, Liverpool John Moores University, UK
Cross-references
UniProtKB/Swiss-Prot
P97541; HSPB6_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
HSPB6_RAT
Primary accession number
P97541
Sequence was last modified on
May 1, 1997 (version 1)
Annotations were last modified on
November 16, 2011 (version 84)
Name and origin of the protein
Description
RecName: Full=Heat shock protein beta-6; Short=HspB6; AltName: Full=Heat shock 20 kDa-like protein p20;
Gene name
Name=Hspb6
Encoded on
Name=Hspb6
Keywords
3D-structure
;
Complete proteome
;
Cytoplasm
;
Direct protein sequencing
;
Nucleus
;
Phosphoprotein
;
Reference proteome
;
Stress response
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
D29960; BAA06227.1
; -; mRNA
IPI
IPI00205489; -
; .
PIR
A53814; A53814
; .
RefSeq
NP_620242.1; NM_138887.1
; .
UniGene
Rn.3201; -
; .
PDB
2WJ5; X-ray
; 1.12 A; A=65-162
PDBsum
2WJ5; -
; .
ProteinModelPortal
P97541; -
; .
STRING
P97541; -
; .
PhosphoSite
P97541; -
; .
PRIDE
P97541; -
; .
Ensembl
ENSRNOT00000028401; ENSRNOP00000028401
; ENSRNOG00000020922; .
GeneID
192245; -
; .
KEGG
rno:192245; -
; .
UCSC
NM_138887; rat
; .
CTD
126393; -
; .
RGD
621554; Hspb6
; .
eggNOG
roNOG15863; -
; .
GeneTree
ENSGT00550000074302; -
; .
HOVERGEN
HBG054766; -
; .
InParanoid
P97541; -
; .
OMA
IAPYYLR; -
; .
OrthoDB
EOG4NS3CX; -
; .
PhylomeDB
P97541; -
; .
NextBio
622874; -
; .
ArrayExpress
P97541; -
; .
Genevestigator
P97541; -
; .
GermOnline
ENSRNOG00000020922; Rattus norvegicus
; .
GO
GO:0005737; C:cytoplasm
; ISS:UniProtKB; .
GO
GO:0005634; C:nucleus
; ISS:UniProtKB; .
GO
GO:0042803; F:protein homodimerization activity
; IPI:UniProtKB; .
GO
GO:0005212; F:structural constituent of eye lens
; IEA:InterPro; .
GO
GO:0006937; P:regulation of muscle contraction
; IEP:RGD; .
GO
GO:0006950; P:response to stress
; IEA:UniProtKB-KW; .
InterPro
IPR001436; Alpha-crystallin/HSP
; .
InterPro
IPR003090; Alpha-crystallin_N
; .
InterPro
IPR002068; Hsp20
; .
InterPro
IPR008978; HSP20-like_chaperone
; .
KO
K09545; -
; .
Pfam
PF00525; Crystallin
; 1; .
Pfam
PF00011; HSP20
; 1; .
PIRSF
PIRSF036514; Sm_HSP_B1
; 1; .
PRINTS
PR00299; ACRYSTALLIN
; .
SUPFAM
SSF49764; HSP20_chap
; 1; .
PROSITE
PS01031; HSP20
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
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