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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0022]' for entry matching: HSPB6_RAT World-2DPAGE Repository (0022):  HSPB6_RAT HSPB6_RAT General information about the entry View entry in simple text format Entry name HSPB6_RAT Primary accession number P97541 integrated into World-2DPAGE Repository (0022) on  May 7, 2010 (release 1) 2D Annotations were last modified on June 22, 2011 (version 2) General Annotations were last modified on  November 24, 2011 (version 2) Name and origin of the protein Description RecName: Full=Heat shock protein beta-6; Short=HspB6; AltName: Full=Heat shock 20 kDa-like protein p20;. Gene name Name=Hspb6 Annotated species Rattus [TaxID: 10114] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae. References [1]   2D-PAGE GEL CHARACTERIZATION DOI=10.1002/pmic.201000593; Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L. ''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity'' Proteomics 11(16):3369-3379 (2011) 2D PAGE maps for identified proteins How to interpret a protein HCR_LCR_HEART {HCR LCR Cardiac Map} Rattus Tissue: Heart   map experimental info   HCR_LCR_HEART MAP LOCATIONS: SPOT 296: pI=6.05; Mw=17551   [identification data] IDENTIFICATION: SPOT 296: SeqCov=68.5%. Peptides MS=9/20. Mascot PMF Score=115 [1]. PEPTIDE EVIDENCE: SPOT 296: 5-VPVQPSWLR-13 (45) / 103-HEERPDEHGFIAR-115 (91) / 33-FGEGLLEAELASLCPAAIAPYYLR-56 (70) [1]. MAPPING (identification): SPOT 296: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]. Copyright Data from Dr. Jatin Burniston, Liverpool John Moores University, UK Cross-references UniProtKB/Swiss-Prot P97541; HSPB6_RAT. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_11 Entry name HSPB6_RAT Primary accession number P97541 Sequence was last modified on  May 1, 1997 (version 1) Annotations were last modified on  November 16, 2011 (version 84) Name and origin of the protein Description RecName: Full=Heat shock protein beta-6; Short=HspB6; AltName: Full=Heat shock 20 kDa-like protein p20; Gene name Name=Hspb6 Encoded on Name=Hspb6 Keywords 3D-structure; Complete proteome; Cytoplasm; Direct protein sequencing; Nucleus; Phosphoprotein; Reference proteome; Stress response. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL D29960; BAA06227.1; -; mRNA IPI IPI00205489; -; . PIR A53814; A53814; . RefSeq NP_620242.1; NM_138887.1; . UniGene Rn.3201; -; . PDB 2WJ5; X-ray; 1.12 A; A=65-162 PDBsum 2WJ5; -; . ProteinModelPortal P97541; -; . STRING P97541; -; . PhosphoSite P97541; -; . PRIDE P97541; -; . Ensembl ENSRNOT00000028401; ENSRNOP00000028401; ENSRNOG00000020922; . GeneID 192245; -; . KEGG rno:192245; -; . UCSC NM_138887; rat; . CTD 126393; -; . RGD 621554; Hspb6; . eggNOG roNOG15863; -; . GeneTree ENSGT00550000074302; -; . HOVERGEN HBG054766; -; . InParanoid P97541; -; . OMA IAPYYLR; -; . OrthoDB EOG4NS3CX; -; . PhylomeDB P97541; -; . NextBio 622874; -; . ArrayExpress P97541; -; . Genevestigator P97541; -; . GermOnline ENSRNOG00000020922; Rattus norvegicus; . GO GO:0005737; C:cytoplasm; ISS:UniProtKB; . GO GO:0005634; C:nucleus; ISS:UniProtKB; . GO GO:0042803; F:protein homodimerization activity; IPI:UniProtKB; . GO GO:0005212; F:structural constituent of eye lens; IEA:InterPro; . GO GO:0006937; P:regulation of muscle contraction; IEP:RGD; . GO GO:0006950; P:response to stress; IEA:UniProtKB-KW; . InterPro IPR001436; Alpha-crystallin/HSP; . InterPro IPR003090; Alpha-crystallin_N; . InterPro IPR002068; Hsp20; . InterPro IPR008978; HSP20-like_chaperone; . KO K09545; -; . Pfam PF00525; Crystallin; 1; . Pfam PF00011; HSP20; 1; . PIRSF PIRSF036514; Sm_HSP_B1; 1; . PRINTS PR00299; ACRYSTALLIN; . SUPFAM SSF49764; HSP20_chap; 1; . PROSITE PS01031; HSP20; 1; . World-2DPAGE Repository (search AC)