World-2DPAGE Repository

RecName: Full=Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial; EC=1.1.1.41; AltName: Full=Isocitric dehydrogenase subunit beta; AltName: Full=NAD(+)-specific ICDH subunit beta; Flags: Precursor;.

Gene name

Name=Idh3B

Annotated species

Rattus norvegicus (Rat) [TaxID: 10116]

Taxonomy

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.

References

[1]	MAPPING ON GEL PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan] Maurya D.K., Sundaram C.S., Bhargava P. ''Proteome profile of the mature rat olfactory bulb'' Proteomics 9(1):2593-2599 (2009)

2D PAGE maps for identified proteins

How to interpret a protein

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb

map experimental info

OB21DSUB

MAP LOCATIONS:

SPOT 447:

pI=7.28; Mw=44000

[identification data]

MAPPING (identification):

SPOT 447: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India

Cross-references

UniProtKB/Swiss-Prot

Q68FX0; IDH3B_RAT.

2D PAGE maps for identified proteins
How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry name	IDH3B_RAT
Primary accession number	Q68FX0
Sequence was last modified on	October 11, 2004 (version 1)
Annotations were last modified on	November 16, 2011 (version 65)
Name and origin of the protein
Description	RecName: Full=Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial; EC=1.1.1.41; AltName: Full=Isocitric dehydrogenase subunit beta; AltName: Full=NAD(+)-specific ICDH subunit beta; Flags: Precursor;
Gene name	Name=Idh3B
Encoded on	Name=Idh3B
Keywords	Acetylation; Complete proteome; Magnesium; Manganese; Metal-binding; Mitochondrion; NAD; Oxidoreductase; Reference proteome; Transit peptide; Tricarboxylic acid cycle.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL	BC079113; AAH79113.1; -; mRNA
IPI	IPI00357924; -; .
RefSeq	NP_446033.1; NM_053581.1; .
UniGene	Rn.1093; -; .
ProteinModelPortal	Q68FX0; -; .
STRING	Q68FX0; -; .
PhosphoSite	Q68FX0; -; .
World-2DPAGE	0004:Q68FX0; -; .
PRIDE	Q68FX0; -; .
Ensembl	ENSRNOT00000009681; ENSRNOP00000009681; ENSRNOG00000007316; .
GeneID	94173; -; .
KEGG	rno:94173; -; .
NMPDR	fig\|10116.3.peg.19717; -; .
UCSC	NM_053581; rat; .
CTD	3420; -; .
RGD	621881; Idh3B; .
eggNOG	roNOG15039; -; .
HOVERGEN	HBG052080; -; .
InParanoid	Q68FX0; -; .
OMA	NPGAWRG; -; .
OrthoDB	EOG43BMP4; -; .
PhylomeDB	Q68FX0; -; .
NextBio	617826; -; .
ArrayExpress	Q68FX0; -; .
Genevestigator	Q68FX0; -; .
GO	GO:0005962; C:mitochondrial isocitrate dehydrogenase complex (NAD+); IC:RGD; .
GO	GO:0004449; F:isocitrate dehydrogenase (NAD+) activity; IDA:RGD; .
GO	GO:0000287; F:magnesium ion binding; IEA:InterPro; .
GO	GO:0051287; F:NAD binding; IEA:InterPro; .
GO	GO:0006103; P:2-oxoglutarate metabolic process; IDA:RGD; .
GO	GO:0006102; P:isocitrate metabolic process; IDA:RGD; .
GO	GO:0006734; P:NADH metabolic process; IDA:RGD; .
GO	GO:0006099; P:tricarboxylic acid cycle; IDA:RGD; .
InterPro	IPR019818; IsoCit/isopropylmalate_DH_CS; .
InterPro	IPR001804; Isocitrate/isopropylmalate_DH; .
InterPro	IPR004434; Isocitrate_DH_NAD; .
InterPro	IPR024084; IsoPropMal-DH-like_dom; .
Gene3D	G3DSA:3.40.718.10; IDH_IMDH; 1; .
KO	K00030; -; .
PANTHER	PTHR11835; IDH_IMDH_dimeric; 1; .
PANTHER	PTHR11835:SF5; PTHR11835:SF5; 1; .
Pfam	PF00180; Iso_dh; 1; .
TIGRFAMs	TIGR00175; Mito_nad_idh; 1; .
PROSITE	PS00470; IDH_IMDH; 1; .

World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server

0001
0002
0003
0004
0005
0006
0007
0008
0009
0010
0011
0012
0014
0017
0018
0019
0020
0021
0022
0023
0024
0026
0027
0029
0030
0031
0032
0034
0035
0036
0037
0038
0039
0040
0042
0043
0044
0046
0047
0050
0051
0053
0054
0056
0059
0061
0062
0063
0066
0068
0069
0076
0077
0080
0084
0085
0088