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World-2DPAGE Repository
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Select Remote Interfaces
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SWISS-2DPAGE
World-2DPAGE Portal
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Searching in 'World-2DPAGE Repository [0022]' for entry
matching:
IF4H_RAT
World-2DPAGE Repository
(0022):
IF4H_RAT
IF4H_RAT
General information about the entry
View entry in simple text format
Entry name
IF4H_RAT
Primary accession number
Q5XI72
integrated into World-2DPAGE Repository (0022) on
May 7, 2010 (release 1)
2D Annotations were last modified on
June 22, 2011 (version 2)
General Annotations were last modified on
November 24, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Eukaryotic translation initiation factor 4H; Short=eIF-4H; AltName: Full=Williams-Beuren syndrome chromosomal region 1 protein homolog;.
Gene name
Name=Eif4h
Synonyms=Wbscr1
Annotated species
Rattus [TaxID:
10114
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.201000593
;
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)
2D PAGE maps for identified proteins
How to interpret a protein
HCR_LCR_HEART
{HCR LCR Cardiac Map}
Rattus
Tissue: Heart
map experimental info
HCR_LCR_HEART
MAP LOCATIONS:
SPOT 284
:
pI=6.67; Mw=27364
[identification data]
IDENTIFICATION:
SPOT 284: SeqCov=21%. Peptides MS=7/20. Mascot PMF Score=42 [
1
].
PEPTIDE EVIDENCE:
SPOT 284: 92-IVVVTAGVR-100 (34) / 309-LKDDEVAQLR-318 (8) [
1
].
MAPPING (identification):
SPOT
284
:
Peptide mass fingerprinting
[
1
].
Copyright
Data from Dr. Jatin Burniston, Liverpool John Moores University, UK
Cross-references
UniProtKB/Swiss-Prot
Q5XI72; IF4H_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
IF4H_RAT
Primary accession number
Q5XI72
Sequence was last modified on
November 23, 2004 (version 1)
Annotations were last modified on
September 21, 2011 (version 63)
Name and origin of the protein
Description
RecName: Full=Eukaryotic translation initiation factor 4H; Short=eIF-4H; AltName: Full=Williams-Beuren syndrome chromosomal region 1 protein homolog;
Gene name
Name=Eif4h
Synonyms=Wbscr1
Encoded on
Name=Eif4h; Synonyms=Wbscr1
Keywords
Acetylation
;
Complete proteome
;
Cytoplasm
;
Direct protein sequencing
;
Initiation factor
;
Phosphoprotein
;
Protein biosynthesis
;
Reference proteome
;
RNA-binding
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
BC083818; AAH83818.1
; -; mRNA
IPI
IPI00370315; -
; .
RefSeq
NP_001006958.1; NM_001006957.1
; .
UniGene
Rn.79423; -
; .
HSSP
P23588; 1WI8
; .
ProteinModelPortal
Q5XI72; -
; .
SMR
Q5XI72; 27-125
; .
STRING
Q5XI72; -
; .
PhosphoSite
Q5XI72; -
; .
PRIDE
Q5XI72; -
; .
Ensembl
ENSRNOT00000050059; ENSRNOP00000043254
; ENSRNOG00000001454; .
GeneID
288599; -
; .
KEGG
rno:288599; -
; .
NMPDR
fig|10116.3.peg.8417; -
; .
UCSC
NM_001006957; rat
; .
CTD
7458; -
; .
RGD
1359222; Eif4h
; .
eggNOG
roNOG04234; -
; .
GeneTree
ENSGT00530000063406; -
; .
HOVERGEN
HBG018193; -
; .
InParanoid
Q5XI72; -
; .
OMA
MGSSRES; -
; .
OrthoDB
EOG46DM3S; -
; .
PhylomeDB
Q5XI72; -
; .
NextBio
628401; -
; .
ArrayExpress
Q5XI72; -
; .
Genevestigator
Q5XI72; -
; .
GO
GO:0048471; C:perinuclear region of cytoplasm
; IEA:UniProtKB-SubCell; .
GO
GO:0000166; F:nucleotide binding
; IEA:InterPro; .
GO
GO:0003743; F:translation initiation factor activity
; IEA:UniProtKB-KW; .
InterPro
IPR012677; Nucleotide-bd_a/b_plait
; .
InterPro
IPR000504; RRM_dom
; .
Gene3D
G3DSA:3.30.70.330; a_b_plait_nuc_bd
; 1; .
Pfam
PF00076; RRM_1
; 1; .
SMART
SM00360; RRM
; 1; .
PROSITE
PS50102; RRM
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
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