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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0019]' for entry matching: LDHB_RAT World-2DPAGE Repository (0019):  LDHB_RAT LDHB_RAT General information about the entry View entry in simple text format Entry name LDHB_RAT Primary accession number P42123 integrated into World-2DPAGE Repository (0019) on  December 9, 2009 (release 1) 2D Annotations were last modified on May 30, 2011 (version 2) General Annotations were last modified on  January 13, 2012 (version 2) Name and origin of the protein Description RecName: Full=L-lactate dehydrogenase B chain; Short=LDH-B; EC=1.1.1.27; AltName: Full=LDH heart subunit; Short=LDH-H;. Gene name Name=Ldhb Synonyms=Ldh-2, Ldh2 Annotated species Rattus norvegicus (Rat) [TaxID: 10116] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus. References [1]   2D-PAGE GEL CHARACTERIZATION DOI=10.1111/j.1471-4159.2010.06719.x; VanGuilder H.D., Yan H., Farley J.A., Sonntag W.E., Freeman W.M. ''Aging alters the expression of neurotransmission-regulating proteins in the hippocampal synaptoproteome'' J of Neurochemistry 113(6):1577-1588 (2010) 2D PAGE maps for identified proteins How to interpret a protein HIPP_SYNAP {Rat hippocampal synaptoproteome} Rattus norvegicus (Rat) Tissue: Hippocampus   map experimental info   HIPP_SYNAP MAP LOCATIONS: SPOT 1103: pI=5.70; Mw=36874   [identification data] IDENTIFICATION: SPOT 1103: Peptides number=12. SeqCov=37.1%. MOWSE score=4.18E+5 [1]. MAPPING (identification): SPOT 1103: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]. Copyright Data from Dr. Willard Freeman, Penn State College of Medicine, USA Cross-references UniProtKB/Swiss-Prot P42123; LDHB_RAT. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_12 Entry name LDHB_RAT Primary accession number P42123 Sequence was last modified on  January 23, 2007 (version 2) Annotations were last modified on  November 16, 2011 (version 99) Name and origin of the protein Description RecName: Full=L-lactate dehydrogenase B chain; Short=LDH-B; EC=1.1.1.27; AltName: Full=LDH heart subunit; Short=LDH-H; Gene name Name=Ldhb Synonyms=Ldh-2, Ldh2 Encoded on Name=Ldhb; Synonyms=Ldh-2, Ldh2 Keywords Acetylation; Complete proteome; Cytoplasm; Direct protein sequencing; Glycolysis; NAD; Oxidoreductase; Phosphoprotein; Reference proteome. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL U07181; AAA50439.1; -; mRNA EMBL BC059149; AAH59149.1; -; mRNA IPI IPI00231783; -; . PIR I62761; I62761; . RefSeq NP_036727.1; NM_012595.1; . UniGene Rn.1785; -; . ProteinModelPortal P42123; -; . SMR P42123; 2-333; . IntAct P42123; 1; . STRING P42123; -; . PhosphoSite P42123; -; . World-2DPAGE 0004:P42123; -; . PRIDE P42123; -; . Ensembl ENSRNOT00000017965; ENSRNOP00000017965; ENSRNOG00000013000; . GeneID 24534; -; . KEGG rno:24534; -; . NMPDR fig|10116.3.peg.22502; -; . UCSC NM_012595; rat; . CTD 3945; -; . RGD 2997; Ldhb; . eggNOG maNOG09588; -; . GeneTree ENSGT00550000074541; -; . HOVERGEN HBG000462; -; . InParanoid P42123; -; . OMA YSPDCTI; -; . OrthoDB EOG4RR6HR; -; . PhylomeDB P42123; -; . NextBio 603604; -; . ArrayExpress P42123; -; . Genevestigator P42123; -; . GermOnline ENSRNOG00000013000; Rattus norvegicus; . GO GO:0005625; C:soluble fraction; IDA:RGD; . GO GO:0042802; F:identical protein binding; IDA:RGD; . GO GO:0019900; F:kinase binding; IPI:RGD; . GO GO:0004459; F:L-lactate dehydrogenase activity; IDA:RGD; . GO GO:0051287; F:NAD binding; IDA:RGD; . GO GO:0006096; P:glycolysis; IEA:UniProtKB-KW; . GO GO:0006089; P:lactate metabolic process; IDA:RGD; . GO GO:0019674; P:NAD metabolic process; IDA:RGD; . InterPro IPR001557; L-lactate/malate_DH; . InterPro IPR011304; L-lactate_DH; . InterPro IPR018177; L-lactate_DH_AS; . InterPro IPR022383; Lactate/malate_DH_C; . InterPro IPR001236; Lactate/malate_DH_N; . InterPro IPR015955; Lactate_DH/Glyco_Ohase_4_C; . InterPro IPR016040; NAD(P)-bd_dom; . Gene3D G3DSA:3.90.110.10; lact_mal_DH; 1; . Gene3D G3DSA:3.40.50.720; NAD(P)-bd; 1; . KO K00016; -; . Pfam PF02866; Ldh_1_C; 1; . Pfam PF00056; Ldh_1_N; 1; . PIRSF PIRSF000102; Lac_mal_DH; 1; . PRINTS PR00086; LLDHDRGNASE; . SUPFAM SSF56327; Lactate_DH/Glyco_hydro_4_C; 1; . TIGRFAMs TIGR01771; L-LDH-NAD; 1; . PROSITE PS00064; L_LDH; 1; . World-2DPAGE Repository (search AC)