World-2DPAGE Repository
Home
|
Contact
Due to scheduled maintenance work, this service will not be available from Tuesday August 23rd 06:00 pm until Wednesday August 24th 08:00 am
CEST
. Apologies for the inconvenience.
!!This displayer contains script commands. You should enable JavaScripting within your browser preferences, or use another browser!
World-2DPAGE Repository
Search by
[accession number]
[description, ID or gene]
[author names]
[spot ID / serial number]
[identification methods]
[pI / Mw range]
[combined fields]
Maps
[experimental info]
[protein list]
[graphical interface]
Databases
0001
0002
0003
0004
0005
0006
0007
0008
0009
0010
0011
0012
0014
0017
0018
0019
0020
0021
0022
0023
0024
0026
0027
0029
0030
0031
0032
0034
0035
0036
0037
0038
0039
0040
0042
0043
0044
0046
0047
0050
0051
0053
0054
0056
0059
0061
0062
0063
0066
0068
0069
0076
0077
0080
0084
0085
0088
use 'Ctrl' to select several
databases
Select Remote Interfaces
[All Interfaces]
SWISS-2DPAGE
World-2DPAGE Portal
Exclude local DBs
has only effect if a remote
interface is selected
Searching in 'World-2DPAGE Repository [0014]' for entry
matching:
MPPB_RAT
World-2DPAGE Repository
(0014):
MPPB_RAT
MPPB_RAT
General information about the entry
View entry in simple text format
Entry name
MPPB_RAT
Primary accession number
Q03346
integrated into World-2DPAGE Repository (0014) on
October 13, 2008 (release 1)
2D Annotations were last modified on
June 1, 2011 (version 3)
General Annotations were last modified on
November 25, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Mitochondrial-processing peptidase subunit beta; EC=3.4.24.64; AltName: Full=Beta-MPP; AltName: Full=P-52; Flags: Precursor;.
Gene name
Name=Pmpcb
Synonyms=Mppb
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.200900680
;
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein
RAT_CEREBELLUM_21D
{Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
map experimental info
RAT_CEREBELLUM_21D
MAP LOCATIONS:
SPOT 2896
:
pI=5.82; Mw=49000
[identification data]
IDENTIFICATION:
SPOT 2896: SeqCov=39%. MascotPMF=99 [
1
].
MAPPING (identification):
SPOT
2896
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
PRIDE
10017.
UniProtKB/Swiss-Prot
Q03346; MPPB_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
MPPB_RAT
Primary accession number
Q03346
Secondary accession number(s)
Q68G08
Sequence was last modified on
January 9, 2007 (version 3)
Annotations were last modified on
November 16, 2011 (version 96)
Name and origin of the protein
Description
RecName: Full=Mitochondrial-processing peptidase subunit beta; EC=3.4.24.64; AltName: Full=Beta-MPP; AltName: Full=P-52; Flags: Precursor;
Gene name
Name=Pmpcb
Synonyms=Mppb
Encoded on
Name=Pmpcb; Synonyms=Mppb
Keywords
Complete proteome
;
Direct protein sequencing
;
Hydrolase
;
Metal-binding
;
Metalloprotease
;
Mitochondrion
;
Protease
;
Reference proteome
;
Transit peptide
;
Zinc
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
L12965; AAA41633.1
; -; mRNA
EMBL
BC078826; AAH78826.1
; -; mRNA
EMBL
D13907; BAA03007.1
; -; mRNA
IPI
IPI00209980; -
; .
PIR
S36390; S36390
; .
RefSeq
NP_071790.1; NM_022395.1
; .
UniGene
Rn.841; -
; .
ProteinModelPortal
Q03346; -
; .
SMR
Q03346; 50-488
; .
STRING
Q03346; -
; .
MEROPS
M16.003; -
; .
PRIDE
Q03346; -
; .
Ensembl
ENSRNOT00000017018; ENSRNOP00000017017
; ENSRNOG00000012693; .
GeneID
64198; -
; .
KEGG
rno:64198; -
; .
NMPDR
fig|10116.3.peg.20650; -
; .
UCSC
NM_022395; rat
; .
CTD
9512; -
; .
RGD
621297; Pmpcb
; .
eggNOG
roNOG04878; -
; .
GeneTree
ENSGT00550000074701; -
; .
HOVERGEN
HBG006393; -
; .
InParanoid
Q03346; -
; .
OMA
IPLMVAN; -
; .
OrthoDB
EOG4XPQFR; -
; .
PhylomeDB
Q03346; -
; .
NextBio
612876; -
; .
ArrayExpress
Q03346; -
; .
Genevestigator
Q03346; -
; .
GermOnline
ENSRNOG00000012693; Rattus norvegicus
; .
GO
GO:0005759; C:mitochondrial matrix
; IEA:UniProtKB-SubCell; .
GO
GO:0004222; F:metalloendopeptidase activity
; IEA:InterPro; .
GO
GO:0008270; F:zinc ion binding
; IEA:InterPro; .
GO
GO:0006627; P:protein processing involved in protein targeting to mitochondrion
; TAS:RGD; .
GO
GO:0006508; P:proteolysis
; IEA:UniProtKB-KW; .
InterPro
IPR011249; Metalloenz_metal-bd
; .
InterPro
IPR011237; Pept_M16_core
; .
InterPro
IPR011765; Pept_M16_N
; .
InterPro
IPR001431; Pept_M16_Zn_BS
; .
InterPro
IPR007863; Peptidase_M16_C
; .
Gene3D
G3DSA:3.30.830.10; Pept_M16_core
; 2; .
KO
K01412; -
; .
Pfam
PF00675; Peptidase_M16
; 1; .
Pfam
PF05193; Peptidase_M16_C
; 1; .
SUPFAM
SSF63411; Metalloenz_metal-bd
; 2; .
PROSITE
PS00143; INSULINASE
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
ExPASy web server